Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00081 and RBAM_000540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence dna-align/BSNT_00081.1.9828.seq
# -bsequence dna-align/RBAM_000540___sspF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00081-RBAM_000540___sspF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00081-RBAM_000540___sspF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00081
# 2: RBAM_000540___sspF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 189
# Identity: 138/189 (73.0%)
# Similarity: 138/189 (73.0%)
# Gaps: 24/189 (12.7%)
# Score: 571.0
#
#
#=======================================
BSNT_00081 1 ---------------------ATGTCAGATGAGTTTAAATATGAGCTGGC 29
||||||||||||||.||||||||||||||
RBAM_000540__ 1 TTGGGCAGACGTCGTGGAGTTATGTCAGATGAGTTCAAATATGAGCTGGC 50
BSNT_00081 30 TAAAGACCTTGGTTTTTATGACACAGTAAAAAATGGCGGCTGGGGCGAAA 79
.||.||||||||||||||.||.||.||.|||||.|..||||||||.|..|
RBAM_000540__ 51 GAAGGACCTTGGTTTTTACGATACGGTGAAAAACGAGGGCTGGGGAGGCA 100
BSNT_00081 80 TTCGGGCTCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCC 129
|||||||.||.||.|||||.||.|||||.||.||.||.|||||.||.|||
RBAM_000540__ 101 TTCGGGCGCGTGACGCCGGGAATATGGTAAAACGCGCGATTGAGATTGCC 150
BSNT_00081 130 GAACAGCAAAT---GGCTCAGAATCAGAATAACCGATAA 165
||||||||.|| |||||||||.||.||||||||||||
RBAM_000540__ 151 GAACAGCAGATGGCGGCTCAGAACCAAAATAACCGATAA 189
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