Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05199 and BSU34420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence dna-align/BSNT_05199.1.22522.seq
# -bsequence dna-align/BSU34420___yveF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05199-BSU34420___yveF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05199-BSU34420___yveF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05199
# 2: BSU34420___yveF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 171
# Identity: 90/171 (52.6%)
# Similarity: 90/171 (52.6%)
# Gaps: 78/171 (45.6%)
# Score: 438.0
#
#
#=======================================
BSNT_05199 1 GTGAAGAAGCCGGTTTTAAAACCATTCGCCTCTTTAGAAATCAAGGTTGA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34420___yv 1 GTGAAGAAGCCGGTTTTAAAACCATTCGCCTCTTTAGAAATCAAGGTTGA 50
BSNT_05199 51 TCCGCCTATCGTGATTGGTGAGACAAGCCTGGGACTGAGACGATTCATTC 100
||||||||||..||||||||||||||||||||||||||||.||
BSU34420___yv 51 TCCGCCTATCACGATTGGTGAGACAAGCCTGGGACTGAGATGA------- 93
BSNT_05199 101 CGATTCGTTCGGGAACAATAACCGGGGAAGTAAAGGGACGTATTTTGCCG 150
BSU34420___yv 93 -------------------------------------------------- 93
BSNT_05199 151 GGCGTGCCGATTCACAAATGA 171
BSU34420___yv 93 --------------------- 93
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