Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05907 and BPUM_3510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:28
# Commandline: needle
# -asequence dna-align/BSNT_05907.1.24716.seq
# -bsequence dna-align/BPUM_3510___yxzF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05907-BPUM_3510___yxzF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05907-BPUM_3510___yxzF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05907
# 2: BPUM_3510___yxzF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 196
# Identity: 80/196 (40.8%)
# Similarity: 80/196 (40.8%)
# Gaps: 92/196 (46.9%)
# Score: 212.0
#
#
#=======================================
BSNT_05907 1 ATGTTTAAGGAAGAGGCAATCAGGGGAATGGTTGAGAAAAAAGAAGGGAG 50
BPUM_3510___y 0 -------------------------------------------------- 0
BSNT_05907 51 AATCGGAGCTTTGAAAAAGATG-----ATCAAAACCGTTATCAAATGGGC 95
.||||||| ||| |.|||| ||.|.||||||||
BPUM_3510___y 1 ----------ATGAAAAA-ATGGCTGAAACAAA----TTTTTAAATGGGC 35
BSNT_05907 96 GCCGGTCATTTACCCGATTGTTCGAAAAATCAT-GAAGGATCGCAAGGTG 144
.||.||.|||||.||..|.||..||||||| || .||.||.||.||.|..
BPUM_3510___y 36 ACCTGTGATTTATCCAGTGGTGAGAAAAAT-ATATAAAGAGCGGAAAGCA 84
BSNT_05907 145 TGTAAACAAAAGAATATGTC----CGCATCTAGAACAGCCGGCTGA 186
|.||||| ||| ||.|| |||||||.|.|
BPUM_3510___y 85 TCTAAAC----------GTCGTAACGTAT------CAGCCGGATAA 114
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