Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04685 and BPUM_2854
See
Amino acid alignment /
Visit
BSNT_04685 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:28
# Commandline: needle
# -asequence dna-align/BSNT_04685___yueD.1.24716.seq
# -bsequence dna-align/BPUM_2854.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04685___yueD-BPUM_2854.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04685___yueD-BPUM_2854.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04685___yueD
# 2: BPUM_2854
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 848
# Identity: 439/848 (51.8%)
# Similarity: 439/848 (51.8%)
# Gaps: 271/848 (32.0%)
# Score: 1077.0
#
#
#=======================================
BSNT_04685___ 1 ATGGAACTTTATATCATCACCGGAGCGTCAAAAGGGCTG----------- 39
|| .||..|||||
BPUM_2854 1 --------------------------GT-GAACCGGCTGCTTGCGCGCGG 23
BSNT_04685___ 40 -GGTCAAGCCATTGCATTACAGGCTTTAGAAAAGGGGCATGAAGTCCATG 88
|.|||.| || ||| |.||..|||.|||||.|||
BPUM_2854 24 AGATCATG----TG---TAC----------ACAGCAGCAAGAAGTGCAT- 55
BSNT_04685___ 89 C--------CTTATCCAGAACGAAA---------ACAGATGTC--TCTCA 119
| ||.||| ||||| |||.|.||| |||.|
BPUM_2854 56 CACCGATTTCTCATC-----CGAAACTTACACATACACAGGTCGATCTGA 100
BSNT_04685___ 120 CA----AAAAACTAACGCAGCA-TCAAATAGACCTCATCAA-----TCTC 159
|| |.||| |||||| .|.|||.| |.|||| ||||
BPUM_2854 101 CAGATGAGAAA-----GCAGCAGCCCAATGG----CTTCAAGATTGTCTC 141
BSNT_04685___ 160 GAAGAAGCTGAACAGCAATTTGAAACATTGCTCTCATCCATCGATTCAGA 209
| || |.|| |||||.|| |...|||
BPUM_2854 142 G-------TG--CCGC------AAACACTG------------GCAGCAG- 163
BSNT_04685___ 210 TCGTTATTCTGGTATTAC-CCTTATT----AATAACGCCGGAATGGTAAC 254
||| ||.|| .|||||| |||||.||.||.|||||.||
BPUM_2854 164 --------CTG--ATGACATCTTATTTGTCAATAATGCAGGCATGGTGAC 203
BSNT_04685___ 255 GCCGATCAAACGTG-CCGGCGAAGCGTCTCTTG--ACGA---GCTTCAGC 298
.||.|||||.|||| ..|||.|.||| | |.|| ||||||.|
BPUM_2854 204 CCCAATCAAGCGTGTGGGGCAAGGCG------GGCAGGATATGCTTCATC 247
BSNT_04685___ 299 GCCATTATCAGCTGAACC---TGACTGCGCCCGTGCTTT--TGAGTCAGC 343
..||||||..|.||||.| |||.| |.||.||| |||||||..
BPUM_2854 248 AGCATTATACGTTGAATCTTGTGATT-----CCTGTTTTGCTGAGTCATG 292
BSNT_04685___ 344 TGTTT---------ACAAAACGGTTTGCTTCATACAGCGGCAAAAAGACG 384
|.||| ||..|| ||||..|..||.||.||.|.|
BPUM_2854 293 TATTTGTTCAGCAGACTCAA---------TCATTTAATGGAAAGAAAATG 333
BSNT_04685___ 385 GTTGTCAACATTACTTCAGGAGCCGCCAAAAATCCATATAAGGGATGGAG 434
.|.||..||.||.||||.|||||.||.||||||||.|||||.||.|||||
BPUM_2854 334 ATCGTTCACCTTTCTTCTGGAGCGGCGAAAAATCCTTATAAAGGCTGGAG 383
BSNT_04685___ 435 CGCGTATTGCAGTTCAAAAGCCGGGCTCGACATGTTTACGAGGACATTCG 484
.|||||||||||.|||||.||.|||||.||.|||||||.|||||| ||.|
BPUM_2854 384 TGCGTATTGCAGCTCAAAGGCAGGGCTTGATATGTTTATGAGGAC-TTTG 432
BSNT_04685___ 485 GATTTGAACAGGAGGATGAAGAGCTG-----CCGGTGAACATGATTTCGT 529
.| |||..||.||.|.||.||| | ||..|.||||.|.||||.|
BPUM_2854 433 CA--TGAGGAGCAGAAGGACGAG--GCATATCCAATTAACACGTTTTCAT 478
BSNT_04685___ 530 TCTCACCTGGAGTGATGGACACTGAGATGCAGGCCGTCATCCGTTCTTCA 579
|.||.||.||...|||.||.||.||.|||||||..|..||.||....|||
BPUM_2854 479 TTTCCCCAGGCACGATTGATACAGATATGCAGGGAGAGATTCGAAAATCA 528
BSNT_04685___ 580 TCGAAAAAGGATTTCCACCACATTGAACGATTCCGGAAATTAAATGAAAC 629
||.|||.||||.|||.|.||.|||||.||.||.|.|.|||||.|||||||
BPUM_2854 529 TCAAAACAGGACTTCGAACAGATTGACCGTTTTCAGCAATTATATGAAAC 578
BSNT_04685___ 630 AGG-------AAGCCTTCGCAGTCCGGA---------CTTTATTGCCGGC 663
||| ||| |||||.|| .|.||||
BPUM_2854 579 AGGCACACTAAAG-------AGTCCAGATGAAGTCGCATGTATT------ 615
BSNT_04685___ 664 ACGCTGCTT--TCTTTACTAGAAAAAGGGACGGAAAA---------CGGC 702
.||||| ||||| ||| ||||..| ||||
BPUM_2854 616 ---TTGCTTGATCTTT--TAG---------CGGATGATCCAGCTGGCGGC 651
BSNT_04685___ 703 CGCATTTATGA----------TAT--TAAAGAGTTTTTGTAG------ 732
..|.|.||||| ||| .|||.| |.||
BPUM_2854 652 GTCGTATATGATGCACGTGAGTATGGAAAAAA------GCAGTCATAA 693
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.