Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03710 and BPUM_2215
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence dna-align/BSNT_03710___glcK.1.24716.seq
# -bsequence dna-align/BPUM_2215___glcK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03710___glcK-BPUM_2215___glcK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03710___glcK-BPUM_2215___glcK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03710___glcK
# 2: BPUM_2215___glcK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1033
# Identity: 674/1033 (65.2%)
# Similarity: 674/1033 (65.2%)
# Gaps: 146/1033 (14.1%)
# Score: 2131.5
#
#
#=======================================
BSNT_03710___ 1 ATG-GACGAGATATGGTTTGCGGGCATTGACCTGGGAGGAACGACGATTA 49
||| .|.|.||| |||||||..||..||||.||.||.||.|||||.||||
BPUM_2215___g 1 ATGATAGGGGAT-TGGTTTGTAGGGGTTGATCTTGGCGGTACGACAATTA 49
BSNT_03710___ 50 AACTCGCTTTTATAAATCAATATGGCGAAATTCAGCATAAGTGGGAAGTT 99
|.||.||.||.||.||||.||||||.||||||||||||||||||||..||
BPUM_2215___g 50 AGCTTGCGTTCATTAATCTATATGGTGAAATTCAGCATAAGTGGGAGATT 99
BSNT_03710___ 100 CCGACTGATAAAACCGGCGACACGATTACTGTCACAATTGCAAAAACAAT 149
||.||.||||||.|.||..|.|||||.||.|||...|||||.|||.||||
BPUM_2215___g 100 CCTACGGATAAATCAGGGCAGACGATCACAGTCGATATTGCCAAATCAAT 149
BSNT_03710___ 150 CGACAGCAAGCTGG-----ATGAG-CTGCAAAAACCGAAGCACATCATCA 193
.|||..|||..||| ||.|| .|||..|||.| ||||| |.||
BPUM_2215___g 150 AGACCACAAATTGGTCGAAATCAGTATGCCCAAATC--AGCAC-TGAT-- 194
BSNT_03710___ 194 AAT-ACATCGGAATGGGTGCGCCAGGCCCTGTAGATA-------TGGCGG 235
| ..||.|||||||||||.||.||.|||||||||| ||
BPUM_2215___g 195 --TGGGATTGGAATGGGTGCACCTGGGCCTGTAGATAAAGTATCTG---- 238
BSNT_03710___ 236 CAGGAGTTGTTTATGAAACAGTAAATCTAGGGTGGAAAAATTATGCTTTA 285
||| ||||.|||.|||||...||||||||.||||.|||.|||.|..|.
BPUM_2215___g 239 --GGA-TTGTCTATAAAACAACGAATCTAGGCTGGACAAACTATCCACTC 285
BSNT_03710___ 286 AAAAACCATCTGGAGACAGAAACCGGCATCCCAGCTGTTATAGAAAATGA 335
|||.|.||.||.|||.||||.||.||..|.|||.||||.||.||||||||
BPUM_2215___g 286 AAAGATCACCTAGAGGCAGAGACAGGACTTCCATCTGTCATCGAAAATGA 335
BSNT_03710___ 336 CGCGAATATTGCTGCGCTCGGGGAAATGTGGAAGGGAGCGGGTGATGGCG 385
.||||||||||||||.|||||.||||||||||||||.||.||.|||||.|
BPUM_2215___g 336 TGCGAATATTGCTGCACTCGGTGAAATGTGGAAGGGTGCAGGCGATGGGG 385
BSNT_03710___ 386 CAAAAGACGTCATTCTCGTGACGCTTGGCACAGGAGTTGGCGGCGGCATC 435
|||||.|..||.|..|.||.||.|||||.|||||.||||||||||||||.
BPUM_2215___g 386 CAAAAAATATCCTGATGGTCACACTTGGTACAGGTGTTGGCGGCGGCATT 435
BSNT_03710___ 436 ATTGCAAATGGTGAAATTGTACATGGCATAAATGGCGCCGGCGGAGAAAT 485
||||.||||||||||.||||.||.||...||..||.||.|||||||||||
BPUM_2215___g 436 ATTGTAAATGGTGAAGTTGTTCAAGGTGAAACAGGGGCTGGCGGAGAAAT 485
BSNT_03710___ 486 CGGCCATATT--TGCAG---CATCCCTGAAGGCGGAGCGCCCTGCAACTG 530
.||||||||| |||.| |||.|| || |||||.||.||.|||||
BPUM_2215___g 486 TGGCCATATTTGTGCCGTTCCATTCC--AA---GGAGCACCGTGTAACTG 530
BSNT_03710___ 531 CGGAAAAACGGGCTGTATCGAAACAATTGCGTCAGCAACCGGAATTGTAA 580
|||||.||||||||||||.|||||.|||||.||.||.||.||.||.||..
BPUM_2215___g 531 CGGAAGAACGGGCTGTATTGAAACGATTGCATCTGCGACTGGCATCGTCC 580
BSNT_03710___ 581 GAATTGCAAAAGAAAAAATAGCAAATGTTAAAAAGATGACACGTTTAAAA 630
|..|||||||.||..||.||| |.||| .|..|
BPUM_2215___g 581 GGCTTGCAAAGGATCAATTAG---------------TCACA----GAGCA 611
BSNT_03710___ 631 GCA-ACC----------GAACA--------ATTGTCAGCGCGGGATGTGT 661
||| ||| |.||| |.||.|.||...||||||||
BPUM_2215___g 612 GCATACCTCTTCACTTGGTACAGTCACGTCACTGACTGCAAAGGATGTGT 661
BSNT_03710___ 662 TTGAAGCGGCGGGTGAAAAT---GATGAAATTGCCCTTGAG-GTGGTTGA 707
||.| |||.|.|||||.| |||||..||| ||.||.| ||.||.||
BPUM_2215___g 662 TTCA---GGCAGCTGAAAGTGGAGATGACCTTG-CCATGCGTGTCGTAGA 707
BSNT_03710___ 708 TTATGTAGCCAAGCATCTTGGTTTGGTGCTCGGAAATTTGGCAAGCTCGC 757
..|.||..|.|..|||||||||.|.||..|.|..|||.|.||.||..||.
BPUM_2215___g 708 AGAAGTGACGACTCATCTTGGTCTAGTCTTAGCGAATCTTGCCAGTGCGT 757
BSNT_03710___ 758 TTAATCCGTCCAAAATCGTTCTTGGCGGCGGCGTATCGAGAGCCGGAGAA 807
|.||.||..|.|||||.||..||||||||||.||.||.|.|||.||.||.
BPUM_2215___g 758 TAAACCCAACAAAAATTGTGATTGGCGGCGGTGTTTCAAAAGCAGGTGAG 807
BSNT_03710___ 808 CTGCTGAGATC----AAAAGTCGAGA--------AAACATTCCGCAAATG 845
||.|| || .|||||.|||| |||.||..||||
BPUM_2215___g 808 CTTCT----TCGTAGTAAAGTAGAGAACGTTGTTAAATATCACGCA---- 849
BSNT_03710___ 846 CGCGTTTCCGCGGGCAGCCCAAGCT---GCTGAT-ATTTC--------AA 883
||||||| || |||||| ||.|| .|
BPUM_2215___g 850 ----TTTCCGC------------CTTGCGCTGATGATGTCGAAGTTGTGA 883
BSNT_03710___ 884 TCGCAGCACTTGGAAATGATGCCGGCGTTATCGGAGGCGCTTGGATCGCT 933
|.||..|||||||.||.|||||.||.||.||.||.||.||.|||||.||.
BPUM_2215___g 884 TTGCCTCACTTGGTAACGATGCAGGTGTCATTGGCGGTGCATGGATGGCA 933
BSNT_03710___ 934 AAAAATGAATGGCTGAAACATCAAAATTGTTAA 966
|||||..|||||.|| |.||||
BPUM_2215___g 934 AAAAACAAATGGTTG------------TCTTAA 954
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