Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03234 and BPUM_1900

See Amino acid alignment / Visit BSNT_03234 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence dna-align/BSNT_03234___msrB.1.24716.seq
#    -bsequence dna-align/BPUM_1900___msrB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03234___msrB-BPUM_1900___msrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03234___msrB-BPUM_1900___msrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03234___msrB
# 2: BPUM_1900___msrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 438
# Identity:     323/438 (73.7%)
# Similarity:   323/438 (73.7%)
# Gaps:           9/438 ( 2.1%)
# Score: 1169.0
# 
#
#=======================================

BSNT_03234___      1 ATGGCGTACAATAAAGAAGAAAAAATAAAGTCATTAAATCGCATGCAATA     50
                     |||.|..||.||||||||.||..|.||||...||||||.||.|||||.||
BPUM_1900___m      1 ATGACAAACGATAAAGAAAAACGACTAAAAGAATTAAACCGTATGCAGTA     50

BSNT_03234___     51 TGAAGTAACGCAAAATAACGGCACGGAGCCGCCATTTCAAAATGAATATT    100
                     .|||||.||.||.|||||.||||||||||||||||||||||||||||.||
BPUM_1900___m     51 CGAAGTCACACAGAATAATGGCACGGAGCCGCCATTTCAAAATGAATTTT    100

BSNT_03234___    101 GGGATCATAAGGAAGAAGGGTTGTATGTAGACATTGTGTCAGGCAAGCCA    150
                     ||||||||||.||||||||..|.|||||.||.||..|.|||||||||||.
BPUM_1900___m    101 GGGATCATAAAGAAGAAGGCATTTATGTCGATATCATCTCAGGCAAGCCG    150

BSNT_03234___    151 TTGTTTACATCCAAGGATAAATTTGATTCCCACTGCGGCTGGCCAAGCTT    200
                     .|.|||.|.||....|||||.||||||.||||.|||||||||||.||.||
BPUM_1900___m    151 CTTTTTTCTTCTTTAGATAAGTTTGATGCCCATTGCGGCTGGCCGAGTTT    200

BSNT_03234___    201 TACAAAGCCGATTGAAGAGGAAGAAGTGGAAGAAAAACTGGACACGAGCC    250
                     .|||||||||.|||||||.||.|||||.|..||.|||.||||.|..||||
BPUM_1900___m    201 CACAAAGCCGCTTGAAGATGAGGAAGTAGCGGAGAAAGTGGATAAAAGCC    250

BSNT_03234___    251 ACGGCATGATTCGCACAGAAGTAAGAAGCCGAACTGCTGATTCTCATCTT    300
                     |.||.|||.|.||.|||||.||..|.|||...||.||||||||||||||.
BPUM_1900___m    251 ATGGGATGGTGCGGACAGAGGTGCGCAGCAAGACAGCTGATTCTCATCTA    300

BSNT_03234___    301 GGCCACGTATTTAATGACGGACCTGGTCCAAACGGACTTCGTTACTGCAT    350
                     |||||.||.|||..|||.||||||||.|||||.||.|||||.||.||.||
BPUM_1900___m    301 GGCCATGTCTTTCCTGATGGACCTGGACCAAATGGTCTTCGGTATTGTAT    350

BSNT_03234___    351 AAATTCAGCAGCGCTGCGGTTTGTTCCGAAGCATAAGCTAAAAGAAGAAG    400
                     .||.|||||.||..||..||||.|.||.||..||.|.||..||.||||||
BPUM_1900___m    351 TAACTCAGCCGCTTTGAAGTTTATCCCAAAAGATGATCTTGAAAAAGAAG    400

BSNT_03234___    401 GATACGAAAGCTATCTG---CATCTCTTTAATAAATAA    435
                     |.||.|   |..||.||   |||||.|||.||..|   
BPUM_1900___m    401 GCTATG---GGGATTTGAAACATCTATTTGATTGA---    432


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