Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02361 and BL03587
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:54
# Commandline: needle
# -asequence dna-align/BSNT_02361___ccpC.1.5803.seq
# -bsequence dna-align/BL03587___ccpC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02361___ccpC-BL03587___ccpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02361___ccpC-BL03587___ccpC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02361___ccpC
# 2: BL03587___ccpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 909
# Identity: 668/909 (73.5%)
# Similarity: 668/909 (73.5%)
# Gaps: 60/909 ( 6.6%)
# Score: 2386.5
#
#
#=======================================
BSNT_02361___ 1 ATGCAGCTTCAAGAGCTTCATATGCTCGTAGTTTTAGCTGAGGAATTAAA 50
||||||||||||||||||||.|||||.||.|||.|.||.||.||||||||
BL03587___ccp 1 ATGCAGCTTCAAGAGCTTCACATGCTTGTCGTTCTGGCGGAAGAATTAAA 50
BSNT_02361___ 51 TATGAGAAAGGCGGCAGAACGGCTTTTTGTATCTCAGCCGGCTTTATCTC 100
||||.|.||.|||||.|||||.||.|||||.||.||||||||.|||||.|
BL03587___ccp 51 TATGCGGAAAGCGGCTGAACGTCTGTTTGTTTCCCAGCCGGCATTATCCC 100
BSNT_02361___ 101 AGCGCTTACAAACCATTGAAAAGGCGTGGGGAAAAAAAATCTTTTTAAGA 150
||||..|.||.|||||.||.||..|.|||||||..|||||.|||||||||
BL03587___ccp 101 AGCGGCTGCAGACCATCGAGAAATCATGGGGAACGAAAATTTTTTTAAGA 150
BSNT_02361___ 151 TCTCAAAAAGGATTAACGGTAACGCCCGCCGGTGAGAAAATCATTCAGTT 200
||.||||||||..|.||.||.|||.|.|||||.||.|||||.||.|||||
BL03587___ccp 151 TCGCAAAAAGGGCTGACTGTCACGTCTGCCGGAGAAAAAATTATCCAGTT 200
BSNT_02361___ 201 TGCGAATGATGTGACATTAGAGCAGGAAAGAATAAGAGAAAATATTGACG 250
|||.||.|||||.|||||.||.|||||||.|.|.|||||.|||||.||.|
BL03587___ccp 201 TGCAAAAGATGTAACATTGGAACAGGAAAAAGTGAGAGAGAATATAGATG 250
BSNT_02361___ 251 AGCTTGAAGGTGAAATTCACGGCACATTGAAGCTTGCCGTCGCCTCCATA 300
||||.||.||.||.||.|||||.||..|.||..|.||.|.|||.||.||.
BL03587___ccp 251 AGCTGGAGGGCGAGATACACGGTACGCTCAAATTGGCGGCCGCTTCGATT 300
BSNT_02361___ 301 ATCGGTCAGCATTGGCTCCCTAAAGTCCTGAAGACGTATGTTGAAAAGTA 350
|||||.|||||||||||.||.||.||.|||||.||.||.|||.||.|.||
BL03587___ccp 301 ATCGGGCAGCATTGGCTTCCGAACGTTCTGAAAACCTACGTTAAACAATA 350
BSNT_02361___ 351 TCCGAATG-CAAAGATCTCGCTCATAACCGGGTGGAGCAGCGAAATGCTG 399
||||||.| |||| |||||.|||.|.|||||.||||||||||||||||||
BL03587___ccp 351 TCCGAACGTCAAA-ATCTCCCTCGTCACCGGCTGGAGCAGCGAAATGCTG 399
BSNT_02361___ 400 AAAAGCTTGTATGAGGATCAGGTTCATATCGGCATTATAAGAGGCAACCC 449
||||||.|.||.||.||.||.||||||||.||||||||.||.||.|||||
BL03587___ccp 400 AAAAGCCTCTACGAAGACCATGTTCATATTGGCATTATCAGGGGAAACCC 449
BSNT_02361___ 450 TGAGTGGAAGGGGCGCAAAG-ATTACTTAAT----GACAGATCATCTGTA 494
.||.||||| .|||.|.||| |.|||||.|| |||..|| ||||
BL03587___ccp 450 GGAATGGAA-AGGCCCTAAGCACTACTTGATGCGGGACGAAT----TGTA 494
BSNT_02361___ 495 TTTAGTGGATACTGAAATTTCCTG---CATCGAAGATATTGCCCATACAG 541
..|.||.|||||.||.|| |.| |||.||.||.||||||.|.||.|
BL03587___ccp 495 CCTTGTCGATACAGAGAT---CCGAAACATTGAGGACATTGCCAAAACGG 541
BSNT_02361___ 542 AACGGCCGTTTATCCAGTTTAAAAGTGATAGCACTTATTTTCAGGAAATT 591
||||||||||.||||||||.|||||.||.|||||.||.|.||||||||||
BL03587___ccp 542 AACGGCCGTTCATCCAGTTCAAAAGCGACAGCACGTACTATCAGGAAATT 591
BSNT_02361___ 592 CAGCACTGGTGGCATCAAAAATTTAAAACGTCGCCGAAACAGACGA-TAT 640
||||||||||||||.|||||.||.|||||.|||||||||||.||.| |||
BL03587___ccp 592 CAGCACTGGTGGCACCAAAAGTTCAAAACATCGCCGAAACAAACCATTAT 641
BSNT_02361___ 641 TGGTTGATCAGATTGAAACGTGCAAACAGATGGCGCTGCACGGAATCGGT 690
| ||.||.||.||||||||.||||||||||||||..|.||||||||||||
BL03587___ccp 642 T-GTCGACCAAATTGAAACATGCAAACAGATGGCTTTCCACGGAATCGGT 690
BSNT_02361___ 691 TATGCCATTTTGCCGTCTGTTACCCTTCAAAATGAAG--------ATAAA 732
|||||.||..|.||.||.||.||.|||| |..|||| ||
BL03587___ccp 691 TATGCGATCCTTCCATCGGTGACGCTTC--ACGGAAGCGGGAGCCAT--- 735
BSNT_02361___ 733 GTGAATAAAATGCCTCTTTTAGACATG--AAAGG----GCATCCGATCGG 776
||..|..||||.|||.|..|.| ||| ||||| ||| |||||
BL03587___ccp 736 GTTCACCAAATCCCTTTGCTTG--ATGCTAAAGGAAAAGCA----ATCGG 779
BSNT_02361___ 777 TCGGGATACATGGTTATTAGGCTATGAGCCTGCCTTTGAACTGAAACAAG 826
..|.|||||.|||.|..|.||.||||||||.||.||..|.|||||.||||
BL03587___ccp 780 CAGAGATACGTGGCTGCTCGGTTATGAGCCGGCTTTCCAGCTGAAGCAAG 829
BSNT_02361___ 827 TTCAAGCTTTTGTACAAG-TGATAAAGGATATGCTGGATCA--GGAAAAT 873
|.||.||.||||||.||| ||..||||.||.|.|.| || ||||
BL03587___ccp 830 TACAGGCGTTTGTAGAAGTTGTGAAAGAATGTACGG---CAATGGAA--- 873
BSNT_02361___ 874 CCATTTTAA 882
|||
BL03587___ccp 874 ------TAA 876
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