Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04842 and BL02163
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:02
# Commandline: needle
# -asequence dna-align/BSNT_04842___yurV.1.5803.seq
# -bsequence dna-align/BL02163___nifU.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04842___yurV-BL02163___nifU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04842___yurV-BL02163___nifU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04842___yurV
# 2: BL02163___nifU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 448
# Identity: 357/448 (79.7%)
# Similarity: 357/448 (79.7%)
# Gaps: 5/448 ( 1.1%)
# Score: 1421.0
#
#
#=======================================
BSNT_04842___ 1 ATGTCTTTTAATGCAAACTTAGATACATTGTACAGACAGGTGATTATGGA 50
|||||||||||||..|||||.||||||.||||..|.||||||||||||||
BL02163___nif 1 ATGTCTTTTAATGTGAACTTGGATACACTGTATCGCCAGGTGATTATGGA 50
BSNT_04842___ 51 TCATTACAAAAACCCGCGAAATAAAGGGGTTTTGAATGACAGCATTGTCG 100
|||.||.|||||||||.||||||||||||||||||||||||||||.||||
BL02163___nif 51 TCACTATAAAAACCCGAGAAATAAAGGGGTTTTGAATGACAGCATCGTCG 100
BSNT_04842___ 101 TGGATATGAACAATCCGACATGCGGCGACCGCATCAGACTGACAATGAAG 150
|.||.||||||||.|||||||||||.|||||.|||||.|||||.||||||
BL02163___nif 101 TTGACATGAACAACCCGACATGCGGTGACCGGATCAGGCTGACGATGAAG 150
BSNT_04842___ 151 CTTGACGGA-GACATCGTGGAAGATGCGAAGTTTGAAGGGGAAGGCTGTT 199
.|.||||| |..|..||.||||||||.||.||||||||.|||||.||.|
BL02163___nif 151 -ATAACGGACGGTAAAGTAGAAGATGCAAAATTTGAAGGCGAAGGATGCT 199
BSNT_04842___ 200 CCATTTCAATGGCATCCGCTTCGATGATGACTCAGGCCATTAAAGGGAAA 249
|.||.||||||||.||.||.||.||||||||.|||||.||.|||||||||
BL02163___nif 200 CAATCTCAATGGCTTCTGCGTCTATGATGACACAGGCGATCAAAGGGAAA 249
BSNT_04842___ 250 GATATTGAAACTGCCCTTTCCATGTCTAAGATTTTCTCGGATATGATGCA 299
||..|.||.||.||||||...|||||...|||.||.||.|||||||||||
BL02163___nif 250 GACGTGGAGACCGCCCTTCAAATGTCACGGATCTTTTCAGATATGATGCA 299
BSNT_04842___ 300 AGGGAAAGAGTATGATGATTCTATAGATCTCGGGGATATTGAAGCCCTTC 349
.||.|||||.||.||.|||||.||.|||.|.||.|||||||||||.||.|
BL02163___nif 300 GGGCAAAGACTACGACGATTCGATTGATTTAGGAGATATTGAAGCTCTGC 349
BSNT_04842___ 350 AAGGCGTTTCAAAATTCCCGGCCCGTATCAAATGTGCAACCCTGTCTTGG 399
||||||||||||||||.||||||||.||.|||||.|||||..||||.|||
BL02163___nif 350 AAGGCGTTTCAAAATTTCCGGCCCGAATTAAATGCGCAACATTGTCATGG 399
BSNT_04842___ 400 AAAGCACTTGAAAAAGGAGTCGCGAAACAAGAAGGCGGCAATTAA--- 444
|||||.||.||||||||.||..|.|||.||.|..|||..||..||
BL02163___nif 400 AAAGCCCTCGAAAAAGGCGTTTCCAAAGAAAACAGCGATAACGAATAA 447
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