Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03678 and BL01566
See
Amino acid alignment /
Visit
BSNT_03678 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence dna-align/BSNT_03678___comGG.1.5803.seq
# -bsequence dna-align/BL01566___comGG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03678___comGG-BL01566___comGG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03678___comGG-BL01566___comGG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03678___comGG
# 2: BL01566___comGG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 416
# Identity: 225/416 (54.1%)
# Similarity: 225/416 (54.1%)
# Gaps: 91/416 (21.9%)
# Score: 443.5
#
#
#=======================================
BSNT_03678___ 1 ATGTATCGTACAAGAGGGTTTATTTATCCAGCTGTTCTTTTTGTGTCAGC 50
.||.|...|.|||.|||.||.||||||||.||||.|.||||.| ||||
BL01566___com 1 GTGAAAAATTCAAAAGGATTCATTTATCCCGCTGCTGTTTTCG---CAGC 47
BSNT_03678___ 51 GCTTGTGCTGTTAAT------CGTGA---ACTTTGCTGCTGCTCAATATA 91
||||.|.|..|| ||.|| |||..||.|| |.||
BL01566___com 48 ---TGTGATTTGCATGCTCTGCGCGAGTCACTCAGCCGC-------TTTA 87
BSNT_03678___ 92 TT------TCACGCTGCATGTTTGAAAAGGAAACAAAAGAGTTATACAT- 134
|| ||| || |.|.|||||.|.||.||||||||||.||..||||
BL01566___com 88 TTAACGAATCA-GC-GAACGTTTGCACAGCAAACAAAAGAATTTCACATT 135
BSNT_03678___ 135 -AGGAGAGAATTTGCTTCAAAATGGGGTGCTTCTTTCGAT-TCGGCATGT 182
|| .|.||..|.||.||||||||..|.||.|.|.|..| || .|||.|
BL01566___com 136 CAG--CAAAACCTTCTCCAAAATGGAATTCTCCATGCCTTGTC-CCATAT 182
BSNT_03678___ 183 TC---TAGAG------GAACGGAAAGGCCAGGAGGGTACGCAGCAATTTC 223
|| .|||| ||| ||||..|| .|..||||
BL01566___com 183 TCACGAAGAGACAAAAGAA---AAAGTTCA------AAAACAGC------ 217
BSNT_03678___ 224 CATATGGACGGGTTTCTTATTACATTCA----TGATACATCGATAAAAGA 269
||||...|.|.||.|||| |..||| .|.| |||| |
BL01566___com 218 ---ATGGCTTGATATCGTATT-CTGTCAGCCCGGCT-CATC--------A 254
BSNT_03678___ 270 ACA----AAAAGAAATCAACTTAAGAGTGTCAACGGAGTCGGGAACAGAA 315
.|| |.|.||...||..||.|| ||..|.||.|..||.||.||||||
BL01566___com 255 GCAGCTCACACGAGTCCAGATTCAG-GTAACGACAGCTTCCGGCACAGAA 303
BSNT_03678___ 316 AGAACTGCACAGATCGTATTTGATCAAAAACAGAAAAAACT---GCTGAG 362
|.||..||.||..|...||.||||..||.|.|..|||||.| ||.|
BL01566___com 304 ACAAGCGCTCAATTTCAATATGATTTAAGAAATCAAAAAATCACGCAG-- 351
BSNT_03678___ 363 ATGGACAGAATAA--- 375
||||..|||||.
BL01566___com 352 -TGGAAGGAATATTAA 366
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.