Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04948 and BL00706
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:08
# Commandline: needle
# -asequence dna-align/BSNT_04948.1.5803.seq
# -bsequence dna-align/BL00706___yvrH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04948-BL00706___yvrH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04948-BL00706___yvrH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04948
# 2: BL00706___yvrH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 786
# Identity: 520/786 (66.2%)
# Similarity: 520/786 (66.2%)
# Gaps: 96/786 (12.2%)
# Score: 1651.0
#
#
#=======================================
BSNT_04948 1 ATGAAAAAAACAGTGACAGAAAGGAACATAAAAGTGGAAAATGCGTCAAT 50
.|||||||||||.||||
BL00706___yvr 1 ---------------------------------TTGGAAAATGCGACAAT 17
BSNT_04948 51 TTTAATCGTAGACGATGAGAAAGCGATTGTGGACATGATCAAACGCGTTC 100
|||.||.||.|||||.||..|.||.|||||..|.|||.||||.|||||.|
BL00706___yvr 18 TTTGATTGTGGACGACGAAGACGCCATTGTTCAAATGGTCAAGCGCGTCC 67
BSNT_04948 101 TCGAAAAAGAAGG-TTATC-GAAATATACTGGATGC-AGCAAGCGCAGAA 147
||...||.||||| ||.|| ||| .|.|||...|| ||| |||||||||
BL00706___yvr 68 TCACGAAGGAAGGATTTTCAGAA--GTTCTGACCGCAAGC-AGCGCAGAA 114
BSNT_04948 148 GAAGCGATTCCCGTTGTG---AAGGCCAATAAGGTTGACTTGATTGTGCT 194
||||||.|...|.|.||| |||| |.|..||..||||.||..|.||
BL00706___yvr 115 GAAGCGCTCGACATCGTGAAAAAGG---ACACCGTGCACTTAATACTTCT 161
BSNT_04948 195 GGATGTCATGATGGGCGGAATGTCCGGTTTTGAAG-----CCTGCACACT 239
.||||||||||||...|||..|.|.||.|||||.| ||||.|
BL00706___yvr 162 CGATGTCATGATGCCGGGACAGACAGGATTTGATGTATCTCCTGAA---- 207
BSNT_04948 240 TATCAGAGAGTATTCAGACGCTCCGATTTTTTTCCTGACGGCAAGATCAT 289
|||||...|.|..|..||||||||||.||.|||.|||||||.|.|.|||
BL00706___yvr 208 -ATCAGGCGGCACACCAACGCTCCGATCTTCTTCTTGACGGCGAAAACAT 256
BSNT_04948 290 CCGA-CGCGGACAAATTATCGGGCTTTGCGGTTGGAGCTGATGACTATAT 338
|||| |.| ||.|||.|.|||||.|||||....||.||||||||.|||||
BL00706___yvr 257 CCGATCTC-GATAAACTGTCGGGTTTTGCCTACGGGGCTGATGATTATAT 305
BSNT_04948 339 CACAAAACCATTTAATCCGCTGGAATTAGCGGCGCGGATCAGAGCGCATC 388
.||||||||.||||||||.|||||||||...||..||||.|.|||.|||.
BL00706___yvr 306 TACAAAACCTTTTAATCCTCTGGAATTAATCGCCAGGATTAAAGCCCATT 355
BSNT_04948 389 TCAAGCGTAC--ATATCAATCGAAAGAAACG----AG----TTCA-AATC 427
|.||..|.|| ||||..|| |||||| | || |||| .|||
BL00706___yvr 356 TAAAAAGAACGTATATACAT--AAAGAA--GTTGCAGCTGCTTCAGTATC 401
BSNT_04948 428 --AAACCTACACATATGATTACTTTACTTTTTC-TCCGCAAAATGCCGAG 474
.|.|||||..||||||...||||| |.|||| |||..|...|||.|||
BL00706___yvr 402 TTCAGCCTACGAATATGAACGCTTTA-TATTTCATCCCGACTTTGCGGAG 450
BSNT_04948 475 TTGATCGTAGGCGGGGAAGCCGTTGCCTGTTCAGCCCAGCTTCTGCAGCT 524
.|||||||.|.|||.|||.|.||...|||.||.||.|||||.||.|||||
BL00706___yvr 451 CTGATCGTGGACGGCGAAACGGTCAGCTGCTCGGCGCAGCTGCTCCAGCT 500
BSNT_04948 525 TTTGCAGTATTTTTGTGAACACCCTAACGTGGTGCTTTCCAAAGATCAAA 574
..||||.||||||||.||.||.||.|||..||||||||||||.|||||||
BL00706___yvr 501 CCTGCAATATTTTTGCGATCATCCGAACAGGGTGCTTTCCAAGGATCAAA 550
BSNT_04948 575 TATATGAAAAAGTATGGGGCTATCCTTCCTACGGTGACAACAACACCGTC 624
|.|||||||||||.||||||..|||.||.||.||.||||.||||||||||
BL00706___yvr 551 TTTATGAAAAAGTGTGGGGCGTTCCATCTTATGGAGACAGCAACACCGTC 600
BSNT_04948 625 ATGGTTCATATTCGCAAGCTTAGGGAGAAGATTGAGCGCGATCCGAGCAA 674
|||||.|||||..|.|||||.||||||||.||.||....||.|||||||.
BL00706___yvr 601 ATGGTACATATCAGAAAGCTGAGGGAGAAAATCGAAAAAGACCCGAGCAG 650
BSNT_04948 675 TCCGGAGTATATTGTAACCGTTCGAGGTCTCGGCTA-----TCGTTTTAT 719
.||.||.||||||||.||..||||.||.||.||.|| |||||
BL00706___yvr 651 CCCCGAATATATTGTCACGATTCGCGGCCTTGGATATAAGTTCGTT---- 696
BSNT_04948 720 CCCAAATCCTG-----AAGGCAAGC---GGTCATGA 747
||.||||||| ||.|..||| || ||||
BL00706___yvr 697 -CCCAATCCTGCACGAAAAGAGAGCGAAGG--ATGA 729
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