Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06292 and RBAM_038150

See DNA alignment / Visit BSNT_06292 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:44
# Commandline: needle
#    -asequence pep-align/BSNT_06292___rnpA.1.9828.seq
#    -bsequence pep-align/RBAM_038150___rnpA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06292___rnpA-RBAM_038150___rnpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06292___rnpA-RBAM_038150___rnpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06292___rnpA
# 2: RBAM_038150___rnpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 116
# Identity:     100/116 (86.2%)
# Similarity:   108/116 (93.1%)
# Gaps:           0/116 ( 0.0%)
# Score: 500.0
# 
#
#=======================================

BSNT_06292___      1 MKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPENDELRVGLSVSKK     50
                     ||||||||||||||||||.|||:|||||||||||||:.:|||||||||||
RBAM_038150__      1 MKKRNRLKKNEDFQKVFKRGTSMANRQFVLYTLDQPKQEELRVGLSVSKK     50

BSNT_06292___     51 IGNAVMRNRIKRLIRQAFLEEKERLKEKDYIIIARKPASQLTFEETKKSL    100
                     |||||:|||:|||||||..||||.||.||:||||||||..|:||||||||
RBAM_038150__     51 IGNAVVRNRVKRLIRQAVQEEKELLKPKDFIIIARKPAGDLSFEETKKSL    100

BSNT_06292___    101 QHLFRKSSLYKKSSSK    116
                     ||||||:|||||||||
RBAM_038150__    101 QHLFRKTSLYKKSSSK    116


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