Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06217 and RBAM_037490

See DNA alignment / Visit BSNT_06217 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:40
# Commandline: needle
#    -asequence pep-align/BSNT_06217___yyzB.1.9828.seq
#    -bsequence pep-align/RBAM_037490___yyzB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06217___yyzB-RBAM_037490___yyzB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06217___yyzB-RBAM_037490___yyzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06217___yyzB
# 2: RBAM_037490___yyzB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 69
# Identity:      26/69 (37.7%)
# Similarity:    43/69 (62.3%)
# Gaps:           2/69 ( 2.9%)
# Score: 119.5
# 
#
#=======================================

BSNT_06217___      1 MHAPLSLLKQMLKEHQIDTEKAVTFEEYIAMRLKLQELMGKFASIGEWDL     50
                     |.:||.||:..|.::|....:..|.:|:|.::..||::|..||:..||:|
RBAM_037490__      1 MQSPLMLLQLKLADYQKKAAELRTIDEFIILKQTLQDMMKVFAACEEWEL     50

BSNT_06217___     51 YQKAADLMMH--IGIQWMK     67
                     |||.||||..  :.|:::.
RBAM_037490__     51 YQKTADLMAQTVLHIRFID     69


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