Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06215 and RBAM_037480

See DNA alignment / Visit BSNT_06215 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:40
# Commandline: needle
#    -asequence pep-align/BSNT_06215___yycD.1.9828.seq
#    -bsequence pep-align/RBAM_037480___yycD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06215___yycD-RBAM_037480___yycD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06215___yycD-RBAM_037480___yycD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06215___yycD
# 2: RBAM_037480___yycD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 66
# Identity:      53/66 (80.3%)
# Similarity:    61/66 (92.4%)
# Gaps:           1/66 ( 1.5%)
# Score: 286.0
# 
#
#=======================================

BSNT_06215___      1 MIKKYAITPNVDADGWFIEVENVAPTALYTSKDAAIEKAKQVAKENSPSK     50
                      :|.||:||:|||||||::||||||||||||||||||||:|.||:|||||
RBAM_037480__      1 -MKTYAVTPSVDADGWFVKVENVAPTALYTSKDAAIEKAEQTAKDNSPSK     49

BSNT_06215___     51 LVIYDQFKNVEEEHSF     66
                     ||||||.||:|||.||
RBAM_037480__     50 LVIYDQHKNIEEERSF     65


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