Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04813 and RBAM_037040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:21
# Commandline: needle
# -asequence pep-align/BSNT_04813___pucB.1.9828.seq
# -bsequence pep-align/RBAM_037040.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04813___pucB-RBAM_037040.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04813___pucB-RBAM_037040.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04813___pucB
# 2: RBAM_037040
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 214
# Identity: 63/214 (29.4%)
# Similarity: 98/214 (45.8%)
# Gaps: 49/214 (22.9%)
# Score: 296.5
#
#
#=======================================
BSNT_04813___ 1 MRSPYLIGVFLAAGKSRRMGQNKLALPLKGENIGSLSLKTALSSRLDHVL 50
::||.||.|.|||:.
RBAM_037040 1 -----------------------------------MALKNALLSELDHIF 15
BSNT_04813___ 51 VVERTEHASLEWIGAPYHAPPFQKRWSLHVCQDAEKGQGHSVSSGVRKAE 100
|: ..:...|.|:...:...|...:||...|:.|:||||||:..|::||.
RBAM_037040 16 VI-TGKGDPLHWLSDVFFLNPLSNKWSQAECEQADKGQGHSIQCGLQKAA 64
BSNT_04813___ 101 SMGADGVVILLADQPQLSVDHLNALVALAPESFAVS---SFLGALT---- 143
...||.|:|||||||.::.|.:|.|: :|:... ||:.|..
RBAM_037040 65 EYEADAVIILLADQPFVTSDIINTLI----DSYQKERRYSFIAAENHHLP 110
BSNT_04813___ 144 -PPIYFSSACFPYVKGLTGDEGARRLLKSGQLGAGVVLEAKDSGELDDID 192
|||.||:.|||.:..|.||:|||.:::...:..|.::..:|.....|:|
RBAM_037040 111 MPPILFSNQCFPVLHQLKGDQGARHVIRESMINTGKMISFQDPLLFYDVD 160
BSNT_04813___ 193 TPEEYDMVRRAMA- 205
|.|:|.::.....
RBAM_037040 161 TVEDYTLLLNKFGE 174
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