Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00904 and RBAM_036880

See DNA alignment / Visit BSNT_00904 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:37
# Commandline: needle
#    -asequence pep-align/BSNT_00904.1.9828.seq
#    -bsequence pep-align/RBAM_036880___yxbF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00904-RBAM_036880___yxbF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00904-RBAM_036880___yxbF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00904
# 2: RBAM_036880___yxbF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity:      54/396 (13.6%)
# Similarity:    98/396 (24.7%)
# Gaps:         226/396 (57.1%)
# Score: 180.5
# 
#
#=======================================

BSNT_00904         1 MSKVDRRITKSQEAIKIALIELMTEKSFDHITIKEISERANVNRGTIYLH     50
                        :...:|..   ||.||:.::.|:....:|:|:|:|||:|:|||:||:
RBAM_036880__      1 ---MPDSVTTD---IKQALLTMLGERDIRRVTMKDIAERAHVSRGTLYLY     44

BSNT_00904        51 YLDKFDLLEKIMEEHINNMGD-FCESAAEMD-------WIESTVH-CMEY     91
                     |.||:.:||.|.||..:.:.: ..:|....|       |  ..|| .:.:
RBAM_036880__     45 YEDKYAILEDIEEEMKDGLSEALYDSLKNKDVLHLHGGW--QKVHPTLSF     92

BSNT_00904        92 LESNYLFFSTMLASEGARYFR-SQFLKFNIEEFRKDVDVTK-GKNYGQSE    139
                     ::.:.:||.||:......||. ..|||   :.||.||.::. ..::..:|
RBAM_036880__     93 VDRHRVFFQTMMDRNKMPYFHFHAFLK---DVFRHDVLLSPVNADFSPTE    139

BSNT_00904       140 -DVIVEFIANAYVGVVEWWLKNEMPYPPRVMAEKVGELLERIL-------    181
                      |:.:.:.|.....:|.:||..|....|..::.:|.:|:.:..       
RBAM_036880__    140 QDMYIHYRALYTYAIVLYWLNEEPGASPEAISGQVWDLISQKRFYWLFGR    189

BSNT_00904       181 --------------------------------------------------    181
                                                                       
RBAM_036880__    190 RMPEQEEKKPADRRVTRTRQALQEAMIGLMAEKKEYAAITISDIARQSNL    239

BSNT_00904       181 --------------------------------------------------    181
                                                                       
RBAM_036880__    240 RRATFYDHYANKEALLKTIIHQSCRDLIGLLTVKGEPADCSMEEAEAALV    289

BSNT_00904       181 --------------------------------------------------    181
                                                                       
RBAM_036880__    290 RLFSALSEGLPLVHFLRECSGVPDVIPEMFRALQSFYLHQPLHIQAGKKL    339

BSNT_00904       181 ----------------------------------------------    181
                                                                   
RBAM_036880__    340 YAYYVASMLAGLIQYRLHEGKDHAPDILAREFLQFLDIKKYRVILL    385


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