Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03125 and RBAM_036870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:59
# Commandline: needle
# -asequence pep-align/BSNT_03125___des.1.9828.seq
# -bsequence pep-align/RBAM_036870___des.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03125___des-RBAM_036870___des.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03125___des-RBAM_036870___des.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03125___des
# 2: RBAM_036870___des
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 352
# Identity: 277/352 (78.7%)
# Similarity: 300/352 (85.2%)
# Gaps: 3/352 ( 0.9%)
# Score: 1476.0
#
#
#=======================================
BSNT_03125___ 1 MTEQTIAHKQKQLTKQVAAFAQPETKNSLIQLLNTFIPFFGLWFLAYLSL 50
||......||..|.||||||:..:||:|:.||.|||:|||.||||||.||
RBAM_036870__ 1 MTNHAATQKQASLKKQVAAFSGADTKHSVNQLFNTFVPFFALWFLAYFSL 50
BSNT_03125___ 51 DVSYLLTLALTVIAAGFLTRIFIIFHDCCHQSFFKQKRYNHILGFLTGVL 100
:||||||||.|||||||||||||||||||||||||||:.|.:.||::|||
RBAM_036870__ 51 NVSYLLTLAFTVIAAGFLTRIFIIFHDCCHQSFFKQKKLNRLFGFISGVL 100
BSNT_03125___ 101 TLFPYLQWQHSHSIHHATSSNLDKRGTGDIWMLTVNEYKAASRRTKLAYR 150
||||:||||.||||||||||||||||||||||:||.||..||..||:.||
RBAM_036870__ 101 TLFPFLQWQRSHSIHHATSSNLDKRGTGDIWMMTVKEYNEASAWTKVRYR 150
BSNT_03125___ 151 LYRNPFIMFILGPIYVFLITNRFNKKGARRKERVNTYLTNLAIVALAAAC 200
|||||||||||||||||||.||||.||||||||.|||.||.|||.||||.
RBAM_036870__ 151 LYRNPFIMFILGPIYVFLIQNRFNVKGARRKERWNTYFTNAAIVLLAAAT 200
BSNT_03125___ 201 CLIFGWQSFLLVQGPIFLISGSIGVWLFYVQHTFEDSYFEADENWSYVQA 250
||:.||::|||||||||||||||||||||||||||||||||||:|.||||
RBAM_036870__ 201 CLLVGWENFLLVQGPIFLISGSIGVWLFYVQHTFEDSYFEADEHWDYVQA 250
BSNT_03125___ 251 AVEGSSFYKLPKLLQWLTGNIGYHHVHHLSPKVPNYKLEVAHEHHEPLKN 300
|||||||||||||||||||||||||||||||||||||||.|||.||||||
RBAM_036870__ 251 AVEGSSFYKLPKLLQWLTGNIGYHHVHHLSPKVPNYKLEAAHEGHEPLKN 300
BSNT_03125___ 301 VPTITLKTSLQSLAFRLWDEDNKQFVSFRAIKHIPVSLPPDSPEKQKLRK 350
||||||||||:|:.|||||||.||||:||..:..|. |....|:.|:|
RBAM_036870__ 301 VPTITLKTSLESMKFRLWDEDEKQFVTFREARKKPA---PHPVPKEPLKK 347
BSNT_03125___ 351 NA 352
||
RBAM_036870__ 348 NA 349
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