Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06095 and RBAM_036740

See DNA alignment / Visit BSNT_06095 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:35
# Commandline: needle
#    -asequence pep-align/BSNT_06095___iolE.1.9828.seq
#    -bsequence pep-align/RBAM_036740___iolE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06095___iolE-RBAM_036740___iolE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06095___iolE-RBAM_036740___iolE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06095___iolE
# 2: RBAM_036740___iolE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     233/298 (78.2%)
# Similarity:   268/298 (89.9%)
# Gaps:           1/298 ( 0.3%)
# Score: 1287.0
# 
#
#=======================================

BSNT_06095___      1 MGKNEILWGIAPIGWRNDDMPEIGAGNTLQHLLSDIVVARFQGTEVGGFF     50
                     |||.:||||||||||||||||||||||||||||||||||.||||||||||
RBAM_036740__      1 MGKQDILWGIAPIGWRNDDMPEIGAGNTLQHLLSDIVVAGFQGTEVGGFF     50

BSNT_06095___     51 PEPAILNKELKLRNLRIAGKWFSSFILRDGLGEAAKTFTLHCEYLQQVNA    100
                     |||::|||||.|||||||||||||||::||:.:.|:.||.||:|||:|.|
RBAM_036740__     51 PEPSVLNKELALRNLRIAGKWFSSFIIQDGIEKMAEQFTEHCDYLQKVGA    100

BSNT_06095___    101 DVAVVSEQTYSVQGLEKNVFTEKPHFTDDEWERLCEGLNHLGEIAAQHGL    150
                     |||:|||||||||||:.:||.|||||:|:||:.||:|||.||:||.::||
RBAM_036740__    101 DVAIVSEQTYSVQGLDIDVFKEKPHFSDEEWDTLCQGLNRLGKIAGEYGL    150

BSNT_06095___    151 KLVYHHHLGTGVQTAEEVDRLMAGTDPAHVHLLYDTGHAYISDGDYMGML    200
                     .|.:||||||||||||||||||.||||.:||||||||||||||||||.:|
RBAM_036740__    151 DLTFHHHLGTGVQTAEEVDRLMDGTDPRYVHLLYDTGHAYISDGDYMTIL    200

BSNT_06095___    201 EKHIGRIKHVHFKDARLNVMEQCRLEGQSFRQSFLKGMFTVPGDGCIDFR    250
                     .||:.||:||||||||.::||:||.||:|||||||:|:|||||||||||.
RBAM_036740__    201 NKHMDRIRHVHFKDARFDIMERCRQEGKSFRQSFLQGIFTVPGDGCIDFT    250

BSNT_06095___    251 EVYQLLLKHSYSGWIVIEAEQDPDVANPLEYALIARNYIDQQLLDLA-    297
                     |||:.|::|.|||||||||||||.||||||||||||.|||.:|||.| 
RBAM_036740__    251 EVYRTLVRHDYSGWIVIEAEQDPAVANPLEYALIARKYIDSELLDPAN    298


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