Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01074 and RBAM_036580

See DNA alignment / Visit BSNT_01074 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence pep-align/BSNT_01074.1.9828.seq
#    -bsequence pep-align/RBAM_036580.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01074-RBAM_036580.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01074-RBAM_036580.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01074
# 2: RBAM_036580
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     256/270 (94.8%)
# Similarity:   260/270 (96.3%)
# Gaps:           4/270 ( 1.5%)
# Score: 1347.0
# 
#
#=======================================

BSNT_01074         1 ----MTVQDICIHLGISRSSYYRWKKNLKKDHPKRHLEKQIGTLCREHQY     46
                         ||||||||||||||:|||||||||.|||||||||||||||||||:|
RBAM_036580        1 MHSTMTVQDICIHLGISRASYYRWKKNLMKDHPKRHLEKQIGTLCREHKY     50

BSNT_01074        47 RYGYRKITAILKKRMCINHKTVQRIMQKNQWQCRVKVKKRKKNGQPYAVV     96
                     ||||||||||||||||||||||||||||||||||||||||||:|||||||
RBAM_036580       51 RYGYRKITAILKKRMCINHKTVQRIMQKNQWQCRVKVKKRKKDGQPYAVV    100

BSNT_01074        97 DNILDRNFQSDHPLEKLVTDITYLPYGQKQLYLSSILDVYNGEVIAFTIG    146
                     |||||||||||.||||||||||||||||||||||||||:|||||||||||
RBAM_036580      101 DNILDRNFQSDRPLEKLVTDITYLPYGQKQLYLSSILDLYNGEVIAFTIG    150

BSNT_01074       147 DKQDTDFVLHTLDQLPTLPENCVLHSDQGSVYTSYEYQKAVKTKGITMSM    196
                     |||||.|||.||||||.|||||||||||||||||||||||||||||||||
RBAM_036580      151 DKQDTAFVLDTLDQLPMLPENCVLHSDQGSVYTSYEYQKAVKTKGITMSM    200

BSNT_01074       197 SRKGTPADNASIESFHSSLKSETFYLNSIDRTTTAIVERTVIEYIHYYNN    246
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
RBAM_036580      201 SRKGTPADNASIESFHSSLKSETFYFNSIDRTTTAIVERTVIEYIHYYNN    250

BSNT_01074       247 IRIQTKLNNQSPINYRQLAV    266
                     ||||||||||||||||||||
RBAM_036580      251 IRIQTKLNNQSPINYRQLAV    270


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