Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06039 and RBAM_036420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:31
# Commandline: needle
# -asequence pep-align/BSNT_06039.1.9828.seq
# -bsequence pep-align/RBAM_036420___hutU.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06039-RBAM_036420___hutU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06039-RBAM_036420___hutU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06039
# 2: RBAM_036420___hutU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 580
# Identity: 401/580 (69.1%)
# Similarity: 434/580 (74.8%)
# Gaps: 124/580 (21.4%)
# Score: 2116.5
#
#
#=======================================
BSNT_06039 0 -------------------------------------------------- 0
RBAM_036420__ 1 MTDVKKSIRAGRGTELECLGWEQEAVLRMLRNNLDPEVAEKPEDLIVYGG 50
BSNT_06039 1 ---------------------------MIRAAR-------NPQAPRVLLA 16
:|::.: :.:|||||||
RBAM_036420__ 51 IGKAARNWDAFHAIERSLKMLKDDETLLIQSGKPVGLFRTHSRAPRVLLA 100
BSNT_06039 17 NSVLVPKWADWEHFHELEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFA 66
|||||||||||||||:||||||||||||||||||||||||||||||||||
RBAM_036420__ 101 NSVLVPKWADWEHFHDLEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFA 150
BSNT_06039 67 ELARQHFGGSLKGTLTLTAGLGGMGGAQPLSVSMNEGVVIAVEVDEKRID 116
||||||||||||||||||||||||||||||||:||:|||||||.||.|||
RBAM_036420__ 151 ELARQHFGGSLKGTLTLTAGLGGMGGAQPLSVTMNDGVVIAVEADETRID 200
BSNT_06039 117 KRIETKYCDRKTASIEEALAWAEEAKLAGKPLSIALLGNAAEVHHTLLNR 166
|||||.|||||||||:|||.|||.|:.||:||||.||||||||||.||||
RBAM_036420__ 201 KRIETNYCDRKTASIDEALRWAEAARQAGEPLSIGLLGNAAEVHHELLNR 250
BSNT_06039 167 GVNIDIVTDQTSAHDPLIGYVPEGYSLDEADRLRQDNPELYVRLAKQSMK 216
||:|||||||||||||||||:|.||||:||||||:|.|||||||:|||||
RBAM_036420__ 251 GVHIDIVTDQTSAHDPLIGYIPAGYSLEEADRLRRDQPELYVRLSKQSMK 300
BSNT_06039 217 KHVEAMLAFQQKGSIVFDYGNNIRQVAKDEGLENAFDFPGFVPAYIRPLF 266
|||||||||::||::||||||||||.||||||.:||||||||||||||||
RBAM_036420__ 301 KHVEAMLAFKKKGAVVFDYGNNIRQAAKDEGLADAFDFPGFVPAYIRPLF 350
BSNT_06039 267 CEGKGPFRWAALSGDPADIYRTDALLKELFPTNKALHRWIDMVQEKVTFQ 316
||||||||||||||||.||||||||||||||.|:||||||||.|:|||||
RBAM_036420__ 351 CEGKGPFRWAALSGDPEDIYRTDALLKELFPENQALHRWIDMAQKKVTFQ 400
BSNT_06039 317 GLPSRICWLGYGERKKMGLAINELVRSGELKAPVVIGRDHLDCGSVASLN 366
||||||||||||||:|||||||||||:||||||:||||||||||||||.|
RBAM_036420__ 401 GLPSRICWLGYGEREKMGLAINELVRNGELKAPIVIGRDHLDCGSVASPN 450
BSNT_06039 367 RETEAMKDGSDAVGDWDVLNALVNTAAGASWVSFHHGGGVGMGYSLHAGM 416
||||||||||||||||.|||||:|||:|||||||||||||||||||||||
RBAM_036420__ 451 RETEAMKDGSDAVGDWAVLNALINTASGASWVSFHHGGGVGMGYSLHAGM 500
BSNT_06039 417 VAVADGSELADERLARVLTSDPGMGIIRHADAGYERAV------------ 454
|||||||.||::||:||||||||||||||||||||:|.
RBAM_036420__ 501 VAVADGSILAEQRLSRVLTSDPGMGIIRHADAGYEKAAQVAEEQDIMIPM 550
BSNT_06039 455 --VRFLQPFFLYATHFQLSYLQKLNFGFPA 482
.|
RBAM_036420__ 551 KKER-------------------------- 554
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