Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05980 and RBAM_036190

See DNA alignment / Visit BSNT_05980 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:29
# Commandline: needle
#    -asequence pep-align/BSNT_05980___bglS.1.9828.seq
#    -bsequence pep-align/RBAM_036190___bglS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05980___bglS-RBAM_036190___bglS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05980___bglS-RBAM_036190___bglS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05980___bglS
# 2: RBAM_036190___bglS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     223/243 (91.8%)
# Similarity:   232/243 (95.5%)
# Gaps:           1/243 ( 0.4%)
# Score: 1234.0
# 
#
#=======================================

BSNT_05980___      1 MPY-LKRVLLLLVTGLFMSLFAVTSTASAQTGGSFFDPFNGYNSGFWQKA     49
                     |.| :||||||||||||:||..:|||||||||||||:|||.||||.||||
RBAM_036190__      1 MFYRMKRVLLLLVTGLFLSLCTITSTASAQTGGSFFEPFNSYNSGLWQKA     50

BSNT_05980___     50 DGYSNGNMFNCTWRANNVSMTSLGEMRLALTSPSYNKFDCGENRSVQTYG     99
                     :|||||:|||||||||||||||.|||||||||||||||||||||||||||
RBAM_036190__     51 NGYSNGDMFNCTWRANNVSMTSSGEMRLALTSPSYNKFDCGENRSVQTYG    100

BSNT_05980___    100 YGLYEVRMKPAKNTGIVSSFFTYTGPTDGTPWDEIDIEFLGKDTTKVQFN    149
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036190__    101 YGLYEVRMKPAKNTGIVSSFFTYTGPTDGTPWDEIDIEFLGKDTTKVQFN    150

BSNT_05980___    150 YYTNGAGNHEKIVDLGFDAANAYHTYAFDWQQNSIKWYVDGQLKHTATNQ    199
                     |||||||||||:.||||||||||||||||||.||||||||||||||||:|
RBAM_036190__    151 YYTNGAGNHEKVADLGFDAANAYHTYAFDWQPNSIKWYVDGQLKHTATSQ    200

BSNT_05980___    200 IPTTPGKIMMNLWNGTGVDEWLGSYNGVNPLYAHYDWVRYTKK    242
                     |||.|||||||||||.|||:|||||||||||||||||||||||
RBAM_036190__    201 IPTNPGKIMMNLWNGIGVDDWLGSYNGVNPLYAHYDWVRYTKK    243


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