Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05948 and RBAM_036080
See
DNA alignment /
Visit
BSNT_05948 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:27
# Commandline: needle
# -asequence pep-align/BSNT_05948___galE.1.9828.seq
# -bsequence pep-align/RBAM_036080___galE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05948___galE-RBAM_036080___galE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05948___galE-RBAM_036080___galE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05948___galE
# 2: RBAM_036080___galE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity: 304/339 (89.7%)
# Similarity: 321/339 (94.7%)
# Gaps: 1/339 ( 0.3%)
# Score: 1617.0
#
#
#=======================================
BSNT_05948___ 1 MAILVTGGAGYIGSHTCVELLNSGYEIVVLDNLSNSSAEALNRVKEITGK 50
||||||||||||||||||||||.||:|||||||||||.|||.|||:||||
RBAM_036080__ 1 MAILVTGGAGYIGSHTCVELLNGGYDIVVLDNLSNSSPEALERVKDITGK 50
BSNT_05948___ 51 DLTFYEADLLDREAVDAVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNN 100
.|.|||||||||:||..||||||||||||||||||||||||:||:|||||
RBAM_036080__ 51 GLVFYEADLLDRDAVHRVFAENEIEAVIHFAGLKAVGESVAVPLRYYHNN 100
BSNT_05948___ 101 LTGTFILCEAMEKYGVKKIVFSSSATVYGVPETSPITEDFPLGATNPYGQ 150
|||||||||||:.:|||||||||||||||||||:||||||||.|||||||
RBAM_036080__ 101 LTGTFILCEAMQAHGVKKIVFSSSATVYGVPETTPITEDFPLSATNPYGQ 150
BSNT_05948___ 151 TKLMLEQILRDLHTADNEWSVALLRYFNPFGAHPSGRIGEDPNGIPNNLM 200
|||||||||||||.||:|||:|||||||||||||||||||||||||||||
RBAM_036080__ 151 TKLMLEQILRDLHKADSEWSIALLRYFNPFGAHPSGRIGEDPNGIPNNLM 200
BSNT_05948___ 201 PYVAQVAVGKLEQLSVFGNDYPTKDGTGVRDYIHVVDLAEGHVKALEKVL 250
||:|||||||||||.||||||||||||||||||||||||||||:||||||
RBAM_036080__ 201 PYIAQVAVGKLEQLQVFGNDYPTKDGTGVRDYIHVVDLAEGHVRALEKVL 250
BSNT_05948___ 251 NSTGADAYNLGTGTGYSVLEMVKAFEKVSGKEVPYRFADRRPGDIATCFA 300
::|||||||||||.||||||||||||||||||||||||.|||||||.|||
RBAM_036080__ 251 DTTGADAYNLGTGRGYSVLEMVKAFEKVSGKEVPYRFAARRPGDIAACFA 300
BSNT_05948___ 301 DPAKAKRDLGWEAKRGLEEMCADSWRWQSSNVNGYKSAE 339
||||||.:|||||||||||||||||:|||||||||:..
RBAM_036080__ 301 DPAKAKAELGWEAKRGLEEMCADSWKWQSSNVNGYQKV- 338
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.