Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01001 and RBAM_035870

See DNA alignment / Visit BSNT_01001 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:41
# Commandline: needle
#    -asequence pep-align/BSNT_01001.1.9828.seq
#    -bsequence pep-align/RBAM_035870___ydhM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01001-RBAM_035870___ydhM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01001-RBAM_035870___ydhM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01001
# 2: RBAM_035870___ydhM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 103
# Identity:      73/103 (70.9%)
# Similarity:    82/103 (79.6%)
# Gaps:          11/103 (10.7%)
# Score: 365.0
# 
#
#=======================================

BSNT_01001         1 -----------MSTSLLVTKMKEYAQSIGEEAEIWAVGQDKAKEDMRKAD     39
                                ||||||||||:.||:||||||||||||||||||.|:.||
RBAM_035870__      1 MKRILLACSSGMSTSLLVTKMQNYARSIGEEAEIWAVGQDKAKEAMKDAD     50

BSNT_01001        40 AVLIGPQMSFLKSELQKEADQYNIRVEVIDMMAYGMADGKKAYEQALSLM     89
                     .|||||||||||.|||||||..:|.|:|||||||||.|||||||||::|:
RBAM_035870__     51 VVLIGPQMSFLKGELQKEADPLHITVDVIDMMAYGMGDGKKAYEQAVALI    100

BSNT_01001        90 VNQ     92
                     .|:
RBAM_035870__    101 ENK    103


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