Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05906 and RBAM_035800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:25
# Commandline: needle
# -asequence pep-align/BSNT_05906___licR.1.9828.seq
# -bsequence pep-align/RBAM_035800___licR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05906___licR-RBAM_035800___licR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05906___licR-RBAM_035800___licR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05906___licR
# 2: RBAM_035800___licR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 652
# Identity: 453/652 (69.5%)
# Similarity: 542/652 (83.1%)
# Gaps: 25/652 ( 3.8%)
# Score: 2335.0
#
#
#=======================================
BSNT_05906___ 1 -------------MAAEAPVTSSFFAAQLNVTMRTARNDIKELQGVLSGH 37
:|||.|||||..||.:.||.||.||||||||.::..|
RBAM_035800__ 1 MLHGRLRELLRLLLAAETPVTSSVIAANVKVTTRTVRNDIKELQTIVEKH 50
BSNT_05906___ 38 GAFVQSVRGSGYKLRIDDEQVFRTLLQDVFQQKKGLPVLPEERMAYLMKR 87
||.:||||||||||.|.:||.|:..|||.|||...:|:.|:||:.|||||
RBAM_035800__ 51 GASIQSVRGSGYKLLIRNEQPFKNWLQDNFQQNSTVPIFPDERIDYLMKR 100
BSNT_05906___ 88 LLLADHYLKLDELAEELFISKSTLQTDLKEVKKRLLPYRIVMETRPNYGF 137
:||||.|||||:|||||||||||||:|||||||||.||.|::||||||||
RBAM_035800__ 101 MLLADGYLKLDDLAEELFISKSTLQSDLKEVKKRLRPYDIILETRPNYGF 150
BSNT_05906___ 138 KLRGDEVQMRYCMAEYIVDERETEIDVLNEKADILPKEEIEIIRSAILKK 187
||||:|:::|||||||:||:||.|.|:|:|||.||||::|.:||:||:|:
RBAM_035800__ 151 KLRGEELRLRYCMAEYLVDDREPEPDLLSEKAGILPKDDIHVIRTAIMKQ 200
BSNT_05906___ 188 MKNDRIPLSNMGLNNLIIHIAIACKRIRTENYVSLFPKDMDHILHQKEYQ 237
::|.:||||..||||||||||||||||||||||||.|:|:..|..:.|||
RBAM_035800__ 201 VRNHKIPLSFFGLNNLIIHIAIACKRIRTENYVSLIPEDLHDIKLETEYQ 250
BSNT_05906___ 238 AAEAIVKELESKLSVTFPKEETAYITMHLLGTKRMTQSQC-GED-TFSIE 285
:||||||||||.||||||::|||||.:||||||||.|||. |:: |..|:
RBAM_035800__ 251 SAEAIVKELESALSVTFPEQETAYIAIHLLGTKRMAQSQLEGKELTRLID 300
BSNT_05906___ 286 EETDQLTLAMIKAVDRELKLGILHDKELKIGLALHMKPAISRNRYGMNLR 335
.||.:||.|||:|::|||||||..|.|||.|||||:||||:|||||||||
RBAM_035800__ 301 GETSRLTEAMIEAIERELKLGITDDNELKAGLALHIKPAINRNRYGMNLR 350
BSNT_05906___ 336 NPMLAAIKEHYPLAFEAGIIAGIVIKEQTGIEIHENEIGYLALHFGAAIE 385
||||:||||:||||||||:||||||||||||:||||||||||||||||||
RBAM_035800__ 351 NPMLSAIKENYPLAFEAGVIAGIVIKEQTGIDIHENEIGYLALHFGAAIE 400
BSNT_05906___ 386 RKKTESPPKRCIIVCASGAGSAQLLREKLRSHFGKRLDILGTAEYYSLDQ 435
|:|||.|||||:|||||||||||||||||||.|.|||:|:|||:|.||||
RBAM_035800__ 401 RRKTERPPKRCLIVCASGAGSAQLLREKLRSRFAKRLEIVGTADYCSLDQ 450
BSNT_05906___ 436 MSYESIDFVISTIPIKKELPVPVLKVNTILGGTDFTKIESILSDEKEKAN 485
:|:||||||:||:||||:||||||||:|:|||.|||||:::|.:::|:.|
RBAM_035800__ 451 LSFESIDFVVSTVPIKKDLPVPVLKVHTLLGGGDFTKIDAMLEEKREQLN 500
BSNT_05906___ 486 RYLKKELVFFQEDLRSKEEVIQFLGQKAVECGFAREEIIDSIFEREDMSP 535
:||.||||.|:||.:||:||:||||:..|.|.|.:.:.|||||||.:||
RBAM_035800__ 501 -FLKPELVFLQQDLETKEDVIRFLGQQVAEAGLASDSLTDSIFEREAISP 549
BSNT_05906___ 536 TCFGNLVAIPHPLVPQTKTTFWAVCTLKKPIDWESQRVQFVCLLCVEKEN 585
|.||||.||||||||||.|||||||||||||||..:|||||||||||||:
RBAM_035800__ 550 TSFGNLTAIPHPLVPQTDTTFWAVCTLKKPIDWADKRVQFVCLLCVEKES 599
BSNT_05906___ 586 KADLQSMYKLLGSILDDPAAVNQLVKCRSYQELSDVFDQKMLS------- 628
|||||.|||.||.:|||||||::|:||.:|||:..||..|...
RBAM_035800__ 600 KADLQHMYKWLGGMLDDPAAVSRLLKCTTYQEVLRVFRDKRSEKDRDTPF 649
BSNT_05906___ 628 -- 628
RBAM_035800__ 650 FR 651
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