Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05586 and RBAM_035610

See DNA alignment / Visit BSNT_05586 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:04
# Commandline: needle
#    -asequence pep-align/BSNT_05586___mta.1.9828.seq
#    -bsequence pep-align/RBAM_035610.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05586___mta-RBAM_035610.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05586___mta-RBAM_035610.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05586___mta
# 2: RBAM_035610
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     104/258 (40.3%)
# Similarity:   161/258 (62.4%)
# Gaps:           6/258 ( 2.3%)
# Score: 513.0
# 
#
#=======================================

BSNT_05586___      1 MKYQVKQVAEISGVSIRTLHHYDNIELLNPSALTDAGYRLYSDADLERLQ     50
                     |..:||:|||:.|||||||||||.|.||.|...||:||||||:.:||:||
RBAM_035610        1 MGMKVKEVAELIGVSIRTLHHYDQIGLLTPQETTDSGYRLYSEENLEQLQ     50

BSNT_05586___     51 QILFFKEFGFRLDEIKEMLDHPNFDRKAALQSQKEILMKKKQRMDEMIRT    100
                     |||||||..|.|.||||:::.|:|:|:.||..||::|::|:.|:|:||.|
RBAM_035610       51 QILFFKELDFSLKEIKEIINSPSFNRREALILQKKMLIEKRNRVDKMIET    100

BSNT_05586___    101 IDRTLLSIDGGETMNKRDLFAGLSKKDIEEHQQTYADEVRKMYGKEIAEE    150
                     ||:::..:.|...|..::.|.|::     .:...|..|.||.:|.:..::
RBAM_035610      101 IDKSIKHLMGEICMTNKERFEGMN-----FNHNLYEQEARKRWGDQPVDK    145

BSNT_05586___    151 TEKRTSAYSADDWSTIMAEFDSIYRRIAARMKHGPDDAEVQAAVGAFRDH    200
                     ...|....:..:...:..::.:::.:.|..:...|...:||.|:..:.|.
RBAM_035610      146 VNIRLKNMTDGEQKDLSDKWTAMFNKFALLINQSPKSPDVQTAIKEWFDF    195

BSNT_05586___    201 ICHYHYDCTLDIFRGLGEVYITDERFTDSINQYGEGLAAFLREAIIIYCD    250
                     :.....:.:.|.|.|||::||.|:|||.:|:|||||||..:.:||.||.|
RBAM_035610      196 LNENFGEYSFDAFYGLGQLYIEDKRFTKNIDQYGEGLAKLMSDAITIYID    245

BSNT_05586___    251 HQENPRP-    257
                     ||:.... 
RBAM_035610      246 HQKKGGTH    253


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