Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05852 and RBAM_035530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:22
# Commandline: needle
# -asequence pep-align/BSNT_05852___ywbN.1.9828.seq
# -bsequence pep-align/RBAM_035530___ywbN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05852___ywbN-RBAM_035530___ywbN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05852___ywbN-RBAM_035530___ywbN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05852___ywbN
# 2: RBAM_035530___ywbN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 418
# Identity: 346/418 (82.8%)
# Similarity: 388/418 (92.8%)
# Gaps: 2/418 ( 0.5%)
# Score: 1867.0
#
#
#=======================================
BSNT_05852___ 1 MSDEQKKPEQIHRRDILKWGAMAGAAVAIGASGLGGLAPLVQTAAKPSKK 50
|||||.|.:||||||:|||||:||||||:|||||||||||.:.||..|||
RBAM_035530__ 1 MSDEQNKEKQIHRRDVLKWGAVAGAAVAVGASGLGGLAPLFKPAATASKK 50
BSNT_05852___ 51 -DEK-EEEQIVPFYGKHQAGITTAHQTYVYFAALDVTAKDKSDIITLFRN 98
||| :.:||||||||||||||||||||||||||||.:.||:|:|:||:.
RBAM_035530__ 51 NDEKRDRDQIVPFYGKHQAGITTAHQTYVYFAALDVMSSDKADVISLFKQ 100
BSNT_05852___ 99 WTSLTQMLTSGKKMSSEQRNQYLPPQDTGESADLSPSNLTVTFGFGPGFF 148
||||||:||||...|.||:|:|:||||||||.||:|:|||||||||||||
RBAM_035530__ 101 WTSLTQLLTSGAVPSGEQKNKYMPPQDTGESQDLAPANLTVTFGFGPGFF 150
BSNT_05852___ 149 EKDGKDRFGLKSKKPKHLAALPAMPNDNLDEKQGGGDICIQVCADDEQVA 198
|||||||||||.|||||||.:|.||||.||:.||||||.||||||:||.|
RBAM_035530__ 151 EKDGKDRFGLKDKKPKHLADIPPMPNDKLDKNQGGGDIVIQVCADNEQTA 200
BSNT_05852___ 199 FHALRNLLNQAVGTCEVRFVNKGFLSGGKNGETPRNLFGFKDGTGNQSTE 248
|||:|||:.||.|.|||||:|||||||||||||||||||||||||||||:
RBAM_035530__ 201 FHAVRNLMKQAAGVCEVRFLNKGFLSGGKNGETPRNLFGFKDGTGNQSTK 250
BSNT_05852___ 249 DDSLMNSIVWVQSGEPDWMTGGTYMAFRKIKMFLEIWDRSSLKDQEDTFG 298
|::|||||||||||||||||||||||||||||||:||||||||:||||||
RBAM_035530__ 251 DENLMNSIVWVQSGEPDWMTGGTYMAFRKIKMFLDIWDRSSLKEQEDTFG 300
BSNT_05852___ 299 RRKSSGAPFGQKKETDPVKLNQIPSNSHVSLAKSTGKQILRRAFSYTEGL 348
|.|||||||||:||||||||||||::||||:|||||:||||||||||:|:
RBAM_035530__ 301 RVKSSGAPFGQQKETDPVKLNQIPADSHVSVAKSTGRQILRRAFSYTDGI 350
BSNT_05852___ 349 DPKTGYMDAGLLFISFQKNPDNQFIPMLKALSAKDALNEYTQTIGSALYA 398
||||||:|||||||.|||:||.||:||||||:||||||||||||||:|:|
RBAM_035530__ 351 DPKTGYVDAGLLFICFQKDPDRQFVPMLKALAAKDALNEYTQTIGSSLFA 400
BSNT_05852___ 399 CPGGCKKGEYIAQRLLES 416
||||||||||||||||||
RBAM_035530__ 401 CPGGCKKGEYIAQRLLES 418
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