Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05839 and RBAM_035440

See DNA alignment / Visit BSNT_05839 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:21
# Commandline: needle
#    -asequence pep-align/BSNT_05839.1.9828.seq
#    -bsequence pep-align/RBAM_035440___ydaS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05839-RBAM_035440___ydaS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05839-RBAM_035440___ydaS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05839
# 2: RBAM_035440___ydaS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 82
# Identity:      71/82 (86.6%)
# Similarity:    76/82 (92.7%)
# Gaps:           1/82 ( 1.2%)
# Score: 378.0
# 
#
#=======================================

BSNT_05839         1 MMSFLISLIVAIIIGWLGSLFVKGDMPGGIIGSMIAGLIGAWIGHGLLGT     50
                      |.|::||||||||||:|||||||.|||||||||||||||||||||||||
RBAM_035440__      1 -MGFIVSLIVAIIIGWIGSLFVKGSMPGGIIGSMIAGLIGAWIGHGLLGT     49

BSNT_05839        51 WGPHLAGFAIIPAVIGAAIVVFLVSLLTRKRG     82
                     |||||||||||||:|||||||||.||:.|.||
RBAM_035440__     50 WGPHLAGFAIIPAIIGAAIVVFLFSLIARSRG     81


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