Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05831 and RBAM_035390

See DNA alignment / Visit BSNT_05831 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:21
# Commandline: needle
#    -asequence pep-align/BSNT_05831___ywcE.1.9828.seq
#    -bsequence pep-align/RBAM_035390___ywcE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05831___ywcE-RBAM_035390___ywcE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05831___ywcE-RBAM_035390___ywcE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05831___ywcE
# 2: RBAM_035390___ywcE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 87
# Identity:      81/87 (93.1%)
# Similarity:    83/87 (95.4%)
# Gaps:           1/87 ( 1.1%)
# Score: 413.0
# 
#
#=======================================

BSNT_05831___      1 MMDMFFAYLLVASATPLFIWLDNKKVALSAIPPIILMWVFFFFYATESLS     50
                      ||||||||||||||||||||||||||||||||||||||||:||||.|||
RBAM_035390__      1 -MDMFFAYLLVASATPLFIWLDNKKVALSAIPPIILMWVFFYFYATSSLS     49

BSNT_05831___     51 PLGHTLMIILFAVNVIVAHIAAFIIYGLPYLRRKRSS     87
                     |||||||||||||||||||||||||||||.|||:||.
RBAM_035390__     50 PLGHTLMIILFAVNVIVAHIAAFIIYGLPRLRRRRSQ     86


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