Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05821 and RBAM_035300

See DNA alignment / Visit BSNT_05821 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:20
# Commandline: needle
#    -asequence pep-align/BSNT_05821.1.9828.seq
#    -bsequence pep-align/RBAM_035300___sacT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05821-RBAM_035300___sacT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05821-RBAM_035300___sacT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05821
# 2: RBAM_035300___sacT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     137/276 (49.6%)
# Similarity:   149/276 (54.0%)
# Gaps:         114/276 (41.3%)
# Score: 714.0
# 
#
#=======================================

BSNT_05821         0 --------------------------------------------------      0
                                                                       
RBAM_035300__      1 MRIDKVLNNNAALIKEDGREKIVMGPGIAFQKRKNDVIQKHKIEKIFVVH     50

BSNT_05821         0 --------------------------------------------------      0
                                                                       
RBAM_035300__     51 DENEKFKQVLETLPEEHIEAAEDIISHAEGELAAPLSDHIHIALADHLSF    100

BSNT_05821         1 --------------MLHEIKALYKKEYEIGLWAIGHVKETLGMSLPEDEA     36
                                   :|||||||||||||||.||:.|||:|||:|||:|||
RBAM_035300__    101 AIERIQNGLQVHNRLLHEIKALYKKEYEIGRWAVEHVKQTLGISLPDDEA    150

BSNT_05821        37 GYIALHIHTAKMDAESMYSALKHTTMIKEMIEKIEQYFNRKVDENSISYQ     86
                     |||||||||||.||:|||||:||||||||||||||.:|.:||||:|||||
RBAM_035300__    151 GYIALHIHTAKADAKSMYSAMKHTTMIKEMIEKIESFFEQKVDEDSISYQ    200

BSNT_05821        87 RLVTHLRYAVSRLESNEALHRMDEEMLYFIQKKYSFAYQCALELAEFLKN    136
                     |||||||||||||:||||||.|||||||||||||.|||:||||||.||||
RBAM_035300__    201 RLVTHLRYAVSRLDSNEALHSMDEEMLYFIQKKYPFAYRCALELAAFLKN    250

BSNT_05821       137 EYQLHLPESEAGYITLHVQRLQDLSE    162
                     ||.|.|||||||||||||||||...|
RBAM_035300__    251 EYDLELPESEAGYITLHVQRLQKNPE    276


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