Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05814 and RBAM_035220
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:19
# Commandline: needle
# -asequence pep-align/BSNT_05814___ywdF.1.9828.seq
# -bsequence pep-align/RBAM_035220___ywdF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05814___ywdF-RBAM_035220___ywdF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05814___ywdF-RBAM_035220___ywdF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05814___ywdF
# 2: RBAM_035220___ywdF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 268
# Identity: 217/268 (81.0%)
# Similarity: 239/268 (89.2%)
# Gaps: 0/268 ( 0.0%)
# Score: 1157.0
#
#
#=======================================
BSNT_05814___ 1 MKISIVIVTYNRIPALCELLESISRQTLKPYEIIIVNDAGESVVPVKALY 50
|.||||||||||||||||||||||.||:||||:||||||||||...|.||
RBAM_035220__ 1 MNISIVIVTYNRIPALCELLESISMQTIKPYEVIIVNDAGESVEQAKQLY 50
BSNT_05814___ 51 PELPIAVINLEKNSGHVAARNAGVKEASGDCIMLCDDDDFFTPGHIEKMA 100
.:|||.:|:||:|:|||.|||||||:||||||||||||||.||||:|:||
RBAM_035220__ 51 SDLPIQIIDLEQNAGHVEARNAGVKKASGDCIMLCDDDDFITPGHLERMA 100
BSNT_05814___ 101 KEIETADFVHSDAEIVSFEEKYGTRYPVSRKLFAYTADYEDMRVFSTYVP 150
..:..|||||||||||||||:.|||||||||.|||||||.||||||||||
RBAM_035220__ 101 AALADADFVHSDAEIVSFEERGGTRYPVSRKPFAYTADYADMRVFSTYVP 150
BSNT_05814___ 151 SGSMYRRFLHDEIGYFDADVHNYWDWDFYLRAAKDYRVKRVPCASVIYAF 200
||||||..|||.:||||.||||||||||||||||.:||||||||||||||
RBAM_035220__ 151 SGSMYRCSLHDTLGYFDPDVHNYWDWDFYLRAAKQHRVKRVPCASVIYAF 200
BSNT_05814___ 201 SDAGDNQSADLGAKRKQYLDRLSEKHGLGELPTKNFAVLLEEPEMKRREA 250
.:.|.|||||||.|||:|||||||||.||||||||||||||||:||||||
RBAM_035220__ 201 FEGGGNQSADLGGKRKRYLDRLSEKHRLGELPTKNFAVLLEEPDMKRREA 250
BSNT_05814___ 251 KSEMVWDGEPVYSRLHRS 268
.:::||||:||:||||.|
RBAM_035220__ 251 PTDIVWDGKPVHSRLHSS 268
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