Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05790 and RBAM_035080

See DNA alignment / Visit BSNT_05790 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:17
# Commandline: needle
#    -asequence pep-align/BSNT_05790___spsJ.1.9828.seq
#    -bsequence pep-align/RBAM_035080___spsJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05790___spsJ-RBAM_035080___spsJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05790___spsJ-RBAM_035080___spsJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05790___spsJ
# 2: RBAM_035080___spsJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:     265/315 (84.1%)
# Similarity:   289/315 (91.7%)
# Gaps:           0/315 ( 0.0%)
# Score: 1413.0
# 
#
#=======================================

BSNT_05790___      1 MAKSYLITGGAGFIGLTFTKLMLRETDARITVLDKLTYASHPEEMEKLKQ     50
                     |.||||||||||||||||||:||:||||:|||||.|||||.|.|:|.||:
RBAM_035080__      1 MPKSYLITGGAGFIGLTFTKMMLKETDAQITVLDNLTYASRPLEIEALKK     50

BSNT_05790___     51 NSRFRFVKGDISVQEDIDRAFDETYDGVIHFAAESHVDRSISQAEPFITT    100
                     |.||||:|||||.:||||:.|.:.||.||||||||||||||:||||||||
RBAM_035080__     51 NGRFRFIKGDISEKEDIDKVFSQMYDAVIHFAAESHVDRSINQAEPFITT    100

BSNT_05790___    101 NVMGTYRLAEAVLKGKAKKLIHISTDEVYGDLKADDPAFTETTPLSPNNP    150
                     |||||||||:|||:|||.:|||||||||||||..||||||||||||||||
RBAM_035080__    101 NVMGTYRLADAVLQGKAGRLIHISTDEVYGDLAPDDPAFTETTPLSPNNP    150

BSNT_05790___    151 YSASKASSDLLVLSYVKTHKLPAIITRCSNNYGPYQHSEKMIPTIIRHAK    200
                     ||||||||||||:|||:||||||||||||||||||||.|||||||||||.
RBAM_035080__    151 YSASKASSDLLVMSYVRTHKLPAIITRCSNNYGPYQHHEKMIPTIIRHAV    200

BSNT_05790___    201 QGLPVPLYGDGLQIRDWLFAEDHCRAIKLILEKGTDGEVYNIGGGNERTN    250
                     .|.||||||||:|||||||||||||||||:|||||.|::|||||||||||
RBAM_035080__    201 NGTPVPLYGDGMQIRDWLFAEDHCRAIKLVLEKGTLGDIYNIGGGNERTN    250

BSNT_05790___    251 KELASVILKHLGCEELFAHVEDRKGHDRRYAINASKLKNELGWRQEVTFE    300
                     |||||.|:|.||.||.|||||||||||||||||||||||||||||:||||
RBAM_035080__    251 KELASFIMKELGVEERFAHVEDRKGHDRRYAINASKLKNELGWRQDVTFE    300

BSNT_05790___    301 EGIARTIQWYTDNDR    315
                     ||:.|||:||||:..
RBAM_035080__    301 EGMRRTIRWYTDSQD    315


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.