Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05760 and RBAM_034820

See DNA alignment / Visit BSNT_05760 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:15
# Commandline: needle
#    -asequence pep-align/BSNT_05760___ywfL.1.9828.seq
#    -bsequence pep-align/RBAM_034820___ywfL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05760___ywfL-RBAM_034820___ywfL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05760___ywfL-RBAM_034820___ywfL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05760___ywfL
# 2: RBAM_034820___ywfL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 287
# Identity:     241/287 (84.0%)
# Similarity:   258/287 (89.9%)
# Gaps:           6/287 ( 2.1%)
# Score: 1239.0
# 
#
#=======================================

BSNT_05760___      1 MANQPIDLLMQPKWRVIDQSSLGPLFDAKQSFAMDDTLCMSVGKGVSPAT     50
                     |..|||||||||.||:||||||||.||||||||||||||.|||||.||||
RBAM_034820__      1 MGKQPIDLLMQPSWRIIDQSSLGPYFDAKQSFAMDDTLCASVGKGESPAT     50

BSNT_05760___     51 ARSWVHHDTIVLGIQDTRLPFLQDGISLLESEGYRVIVRNSGGLAVVLDD    100
                     |||||||.||||||||||||||:||:.|||.||||||||||||||||||:
RBAM_034820__     51 ARSWVHHRTIVLGIQDTRLPFLEDGVKLLEDEGYRVIVRNSGGLAVVLDE    100

BSNT_05760___    101 GVLNISLIFEDEKKGIDIDKGYEAMVELMRRMLRPYNAKIEAYEIEGSYC    150
                     |||||||||||||||||||:|||||.||:||||||::|:||||||:||||
RBAM_034820__    101 GVLNISLIFEDEKKGIDIDRGYEAMTELVRRMLRPHHAEIEAYEIKGSYC    150

BSNT_05760___    151 PGSYDLSINGKKFAGISQRRVRGGVAVQIYLCADKSGSERADLIRRFYQA    200
                     ||||||||.|:|||||||||:|||.|||||||||||||||||||||||||
RBAM_034820__    151 PGSYDLSIGGRKFAGISQRRLRGGTAVQIYLCADKSGSERADLIRRFYQA    200

BSNT_05760___    201 ALKDKQNDKKGVYPEIRPETMASLSELLQKDISVQDLMFALLTELKALST    250
                     |||||.||.|||||:|||||||||||||:.||:|||||.|||||||.||.
RBAM_034820__    201 ALKDKSNDTKGVYPDIRPETMASLSELLRTDITVQDLMLALLTELKELSG    250

BSNT_05760___    251 RLYSAGLSIDEEMEFEKNLARMAERNAKVFG------    281
                     |||:||||.:|||.|||||.||.|||.||||      
RBAM_034820__    251 RLYAAGLSPEEEMVFEKNLTRMLERNEKVFGTQESLD    287


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