Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05681 and RBAM_034330
See
DNA alignment /
Visit
BSNT_05681 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:10
# Commandline: needle
# -asequence pep-align/BSNT_05681___ywjF.1.9828.seq
# -bsequence pep-align/RBAM_034330___ywjF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05681___ywjF-RBAM_034330___ywjF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05681___ywjF-RBAM_034330___ywjF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05681___ywjF
# 2: RBAM_034330___ywjF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 708
# Identity: 594/708 (83.9%)
# Similarity: 647/708 (91.4%)
# Gaps: 9/708 ( 1.3%)
# Score: 3197.0
#
#
#=======================================
BSNT_05681___ 1 MSGFLIANTLLFLIVTAYAVYLFVYLVKTRLAYIKLGQKEQFDQRFKERL 50
|:.||:.|.|||..||||||||||||::||:|||||||:|:||:|.||||
RBAM_034330__ 1 MNAFLMVNALLFSAVTAYAVYLFVYLIRTRIAYIKLGQREEFDKRLKERL 50
BSNT_05681___ 51 HDIWVNVFGQKKLLKDKKSGIIHVMFFYGFILVQFGAIDFIIKGLAPGRN 100
..||||||||||||||||||||||:||||||||||||||||:|||.|.|:
RBAM_034330__ 51 QKIWVNVFGQKKLLKDKKSGIIHVLFFYGFILVQFGAIDFILKGLLPDRH 100
BSNT_05681___ 101 LPLGPVYPAFTFFQEIVTFLILIAVGWAFYRRYIEKLVRLKRGFKAGLVL 150
||.||:|||||||||||||||||||.||||||||||||||||||||||||
RBAM_034330__ 101 LPFGPLYPAFTFFQEIVTFLILIAVVWAFYRRYIEKLVRLKRGFKAGLVL 150
BSNT_05681___ 151 IFIGGLMLTVLLGNGMNLIWHEHGLSWSEPIASGIAFMLSGVGKTGAAVI 200
:||||||:||||||.|||:||:|.|||:|||||.||.:|.|:....||.:
RBAM_034330__ 151 LFIGGLMVTVLLGNAMNLLWHDHSLSWTEPIASSIAIVLGGLSAPAAAAV 200
BSNT_05681___ 201 FYIAWWIHLLFLLSFLVYVPQSKHAHLIAGPANVFFNRMESAGKLEKIDF 250
||::||:||||||||||||||||||||||||||||.:|::|.||||||||
RBAM_034330__ 201 FYVSWWLHLLFLLSFLVYVPQSKHAHLIAGPANVFLSRLDSKGKLEKIDF 250
BSNT_05681___ 251 TDETKESYGAGKIEDFRQSQLLDLYACVECGRCTNMCPATGTGKMLSPMD 300
|||||||||.|||||||:|||:|||||||||||||||||:||||||||||
RBAM_034330__ 251 TDETKESYGVGKIEDFRRSQLVDLYACVECGRCTNMCPASGTGKMLSPMD 300
BSNT_05681___ 301 LILRLRDHLTEKGAAVTSRSPWVPAAAFRHTRGNQLAAASAGSGSQEAAA 350
|||:||||||||||||||:||||||..|:||:.|||||||:|.||:||||
RBAM_034330__ 301 LILKLRDHLTEKGAAVTSKSPWVPAPVFQHTKANQLAAASSGGGSREAAA 350
BSNT_05681___ 351 ALDYNPSLIGDVITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLVL 400
|:||||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_034330__ 351 AIDYNPSLIGDVITAEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLVL 400
BSNT_05681___ 401 TEGKMDSDAQRAMTSIERQGNPWGLNRKERENWRDEAPDAEIPTVKEMKK 450
||||||||||||||||||||||||||||||||||::| |.||||||||||
RBAM_034330__ 401 TEGKMDSDAQRAMTSIERQGNPWGLNRKERENWREQA-DTEIPTVKEMKK 449
BSNT_05681___ 451 EGKEFEYLFWVGSMGSYDNRSQKIAISFAKLLNHAGVSFAILGNKEKNSG 500
:.|||:|||||||||||||||||||:|||||||.||||||||||||||||
RBAM_034330__ 450 QDKEFDYLFWVGSMGSYDNRSQKIAVSFAKLLNEAGVSFAILGNKEKNSG 499
BSNT_05681___ 501 DTPRRLGNEFLFQELAEKNISEFEKNDVKKIVTIDPHAYNLFKNEYPDFG 550
|||||||||||||||||.||.||||:.:||||||||||||:|||||||||
RBAM_034330__ 500 DTPRRLGNEFLFQELAEHNIGEFEKHGIKKIVTIDPHAYNMFKNEYPDFG 549
BSNT_05681___ 551 FEGEVYHHTEVLAELVKNGKLKPQHPLHETITFHDSCYLGRYNEVYDPPR 600
|..|||||||:|||||..|||||.||::||||||||||||||||||:|||
RBAM_034330__ 550 FRAEVYHHTELLAELVSQGKLKPLHPVNETITFHDSCYLGRYNEVYEPPR 599
BSNT_05681___ 601 EILKGIPGVQLVEMERNRETGMCCGAGGGLMWMEEETGNRINVARTEQAL 650
.|||.||||||.||||:||.||||||||||||||||||.|||.|||||||
RBAM_034330__ 600 AILKAIPGVQLKEMERSRENGMCCGAGGGLMWMEEETGARINTARTEQAL 649
BSNT_05681___ 651 AVNPSVISSGCPYCLTMLGDGTKAKEAEDQVKTYDVVELLAQSVLGADLK 700
:|:|:||||||||||||||||||||||||.:.||||.||||.||.||
RBAM_034330__ 650 SVSPTVISSGCPYCLTMLGDGTKAKEAEDAIGTYDVSELLAMSVFGA--- 696
BSNT_05681___ 701 MGEKQ--- 705
|||
RBAM_034330__ 697 --EKQESL 702
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.