Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05648 and RBAM_034140

See DNA alignment / Visit BSNT_05648 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:08
# Commandline: needle
#    -asequence pep-align/BSNT_05648___ywlA.1.9828.seq
#    -bsequence pep-align/RBAM_034140___ywlA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05648___ywlA-RBAM_034140___ywlA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05648___ywlA-RBAM_034140___ywlA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05648___ywlA
# 2: RBAM_034140___ywlA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 124
# Identity:      92/124 (74.2%)
# Similarity:   106/124 (85.5%)
# Gaps:           4/124 ( 3.2%)
# Score: 503.0
# 
#
#=======================================

BSNT_05648___      1 MKYNYTVLLSAFTMSVLYSVIYIHSFIIAALITMAFYFLFPYLIFALPLQ     50
                     |||||||||||..|||:||::|:|.|||||.|:|||||||||||||||||
RBAM_034140__      1 MKYNYTVLLSAACMSVIYSILYVHQFIIAAFISMAFYFLFPYLIFALPLQ     50

BSNT_05648___     51 IMMNKKPKRFSPLYLLYYLAAAFIANAIIFGVLQPSGQSLFQNTAFYLFA    100
                     ..:|||||||.|||.||||..:||||.||||:|||||||||.|:|||:||
RBAM_034140__     51 YFLNKKPKRFHPLYFLYYLGVSFIANGIIFGLLQPSGQSLFSNSAFYIFA    100

BSNT_05648___    101 VLTALIYWIWDSVLLQKKEA----    120
                     ||||:|||:|||||||::..    
RBAM_034140__    101 VLTAVIYWVWDSVLLQRQNPATEA    124


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