Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05639 and RBAM_034080

See DNA alignment / Visit BSNT_05639 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:08
# Commandline: needle
#    -asequence pep-align/BSNT_05639___rpiB.1.9828.seq
#    -bsequence pep-align/RBAM_034080___ywlF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05639___rpiB-RBAM_034080___ywlF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05639___rpiB-RBAM_034080___ywlF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05639___rpiB
# 2: RBAM_034080___ywlF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:     136/149 (91.3%)
# Similarity:   143/149 (96.0%)
# Gaps:           0/149 ( 0.0%)
# Score: 725.0
# 
#
#=======================================

BSNT_05639___      1 MKVAIASDHGGVHIRNEIKELMDELQIEYIDMGCDCGSGSVDYPDYAFPV     50
                     |||||||||||||||.|||.|:||||||||||||:||:|||||.||||||
RBAM_034080__      1 MKVAIASDHGGVHIREEIKSLLDELQIEYIDMGCECGAGSVDYSDYAFPV     50

BSNT_05639___     51 AEKVVSGEVDRGILICGTGIGMSISANKVKGIRCALAHDTFSAKATREHN    100
                     |||||:||.|||||||||||||||||||||||||||||||||||||||||
RBAM_034080__     51 AEKVVNGEADRGILICGTGIGMSISANKVKGIRCALAHDTFSAKATREHN    100

BSNT_05639___    101 DTNILAMGERVIGPGLAREIAKTWLTTEFTGGRHQTRIGKISDYEEKNL    149
                     |||:||||||||||||||||||.|||||||||||:.|||||:|||||||
RBAM_034080__    101 DTNVLAMGERVIGPGLAREIAKVWLTTEFTGGRHERRIGKIADYEEKNL    149


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.