Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05630 and RBAM_034030

See DNA alignment / Visit BSNT_05630 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:07
# Commandline: needle
#    -asequence pep-align/BSNT_05630___atpB.1.9828.seq
#    -bsequence pep-align/RBAM_034030___atpB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05630___atpB-RBAM_034030___atpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05630___atpB-RBAM_034030___atpB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05630___atpB
# 2: RBAM_034030___atpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity:     209/244 (85.7%)
# Similarity:   215/244 (88.1%)
# Gaps:          21/244 ( 8.6%)
# Score: 1071.0
# 
#
#=======================================

BSNT_05630___      1 ---------------------MITVASVIVLLIAILTTRTLSIRPGKAQN     29
                                          |||||||||||||||||||||||||||||
RBAM_034030__      1 MNHDYRTIDLFGLTFNLTNILMITVASVIVLLIAILTTRTLSIRPGKAQN     50

BSNT_05630___     30 FMEWIVDFVRNIIGSTMDLKTGANFLALGVTLLMYIFVSNMLGLPFSITI     79
                     |||||||||||||||||||||||||||||||||||||||||||||||:|:
RBAM_034030__     51 FMEWIVDFVRNIIGSTMDLKTGANFLALGVTLLMYIFVSNMLGLPFSVTV    100

BSNT_05630___     80 GHELWWKSPTADPAITLTLAVMVVALTHYYGVKMKGLKEYSKDYLRPVPF    129
                     ||||||||||||||||||||||||:||||||||||||||||||||||||.
RBAM_034030__    101 GHELWWKSPTADPAITLTLAVMVVSLTHYYGVKMKGLKEYSKDYLRPVPL    150

BSNT_05630___    130 MLPMKIIEEFANTLTLGLRLYGNIFAGEILLGLLAGLATSHYSQSVALGL    179
                     |.|||||||||||||||||||||||||||||||||.|||:.||.|..|||
RBAM_034030__    151 MFPMKIIEEFANTLTLGLRLYGNIFAGEILLGLLANLATNFYSNSFFLGL    200

BSNT_05630___    180 VGTIGAILPMLAWQAFSLFIGAIQAFIFTMLTMVYMSHKISHDH    223
                     |||:|||:|||||||||||||.||||||||||||||||||||||
RBAM_034030__    201 VGTVGAIIPMLAWQAFSLFIGTIQAFIFTMLTMVYMSHKISHDH    244


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