Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05625 and RBAM_033990

See DNA alignment / Visit BSNT_05625 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:07
# Commandline: needle
#    -asequence pep-align/BSNT_05625___atpA.1.9828.seq
#    -bsequence pep-align/RBAM_033990___atpA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05625___atpA-RBAM_033990___atpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05625___atpA-RBAM_033990___atpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05625___atpA
# 2: RBAM_033990___atpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 502
# Identity:     491/502 (97.8%)
# Similarity:   496/502 (98.8%)
# Gaps:           0/502 ( 0.0%)
# Score: 2470.0
# 
#
#=======================================

BSNT_05625___      1 MSIKAEEISTLIKQQIQNYQSDIEVQDVGTVIQVGDGIARVHGLDNCMAG     50
                     |||||||||||||||||||||:|||.||||||||||||||||||||||||
RBAM_033990__      1 MSIKAEEISTLIKQQIQNYQSEIEVHDVGTVIQVGDGIARVHGLDNCMAG     50

BSNT_05625___     51 ELVEFSNGVLGMAQNLEESNVGIVILGPFSEIREGDEVKRTGRIMEVPVG    100
                     ||||||||||||||||||||||||||||:.:|||||||||||||||||||
RBAM_033990__     51 ELVEFSNGVLGMAQNLEESNVGIVILGPYRDIREGDEVKRTGRIMEVPVG    100

BSNT_05625___    101 EELIGRIVNPLGQPVDGLGPILTSKTRPIESPAPGVMDRKSVHEPLQTGI    150
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
RBAM_033990__    101 EELIGRIVNPLGQPVDGLGPILTSKTRPIESQAPGVMDRKSVHEPLQTGI    150

BSNT_05625___    151 KAIDALIPIGRGQRELIIGDRQTGKTSVAIDAILNQKDQDMICVYVAIGQ    200
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
RBAM_033990__    151 KAIDALIPIGRGQRELIIGDRQTGKTSVAIDTILNQKDQDMICVYVAIGQ    200

BSNT_05625___    201 KESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVTMAEEFM    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
RBAM_033990__    201 KESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVTMGEEFM    250

BSNT_05625___    251 YSGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLER    300
                     |:||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_033990__    251 YNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLER    300

BSNT_05625___    301 AAKLSDAKGAGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFF    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_033990__    301 AAKLSDAKGAGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFF    350

BSNT_05625___    351 SGVRPAINAGLSVSRVGGSAQIKAMKKVSGTLRLDLASYRELEAFAQFGS    400
                     ||||||||||||||||||||||||||||:|||||||||||||||||||||
RBAM_033990__    351 SGVRPAINAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELEAFAQFGS    400

BSNT_05625___    401 DLDQATQAKLNRGARTVEVLKQDLNKPLPVEKQVAILYALTKGYLDDIPV    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_033990__    401 DLDQATQAKLNRGARTVEVLKQDLNKPLPVEKQVAILYALTKGYLDDIPV    450

BSNT_05625___    451 ADIRRFEEEYYMYLDQNHKDLLDGIAKTGNLPADEDFNAAIEGFKRTFAP    500
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
RBAM_033990__    451 ADIRRFEEEYYMYLDQNHKDLLDGIAKTGNLPADEDFKAAIEGFKRTFAP    500

BSNT_05625___    501 SN    502
                     ||
RBAM_033990__    501 SN    502


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