Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05593 and RBAM_033830

See DNA alignment / Visit BSNT_05593 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:05
# Commandline: needle
#    -asequence pep-align/BSNT_05593___ureA.1.9828.seq
#    -bsequence pep-align/RBAM_033830___ureA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05593___ureA-RBAM_033830___ureA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05593___ureA-RBAM_033830___ureA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05593___ureA
# 2: RBAM_033830___ureA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 105
# Identity:      96/105 (91.4%)
# Similarity:   102/105 (97.1%)
# Gaps:           0/105 ( 0.0%)
# Score: 489.0
# 
#
#=======================================

BSNT_05593___      1 MKLTPVEQEKLLIFAAGELAKQRKARGVLLNYPEAAAYITCFIMEGARDG     50
                     ||||||||||||||.|||||||||||||||||||||||:||::|||||||
RBAM_033830__      1 MKLTPVEQEKLLIFTAGELAKQRKARGVLLNYPEAAAYLTCYLMEGARDG     50

BSNT_05593___     51 KGVAELMEAGRHVLTEKDVMEGVPEMLESIQVEATFPDGVKLVTVHQPIS    100
                     |.||||||:||:|||||||||||||||:|||||||||||||||||||||.
RBAM_033830__     51 KSVAELMESGRNVLTEKDVMEGVPEMLDSIQVEATFPDGVKLVTVHQPIK    100

BSNT_05593___    101 AEVKS    105
                     |||||
RBAM_033830__    101 AEVKS    105


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.