Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05562 and RBAM_033630

See DNA alignment / Visit BSNT_05562 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:03
# Commandline: needle
#    -asequence pep-align/BSNT_05562___ywoH.1.9828.seq
#    -bsequence pep-align/RBAM_033630___ywoH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05562___ywoH-RBAM_033630___ywoH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05562___ywoH-RBAM_033630___ywoH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05562___ywoH
# 2: RBAM_033630___ywoH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 137
# Identity:     111/137 (81.0%)
# Similarity:   123/137 (89.8%)
# Gaps:           0/137 ( 0.0%)
# Score: 588.0
# 
#
#=======================================

BSNT_05562___      1 MSYVNRHLIHQINQSARLIAKKANEQLEPFGLYSSQWSVLYCLRTIGPMT     50
                     |.:|||.|||||||.||||.|||||:||||||||||||:||||:||||||
RBAM_033630__      1 MIHVNRRLIHQINQCARLITKKANERLEPFGLYSSQWSILYCLKTIGPMT     50

BSNT_05562___     51 QKEIWSYLNVEAPTVTRTIKRLEENGWVQRRQGEDKREKLVVLTKEAEKK    100
                     |||||||||||||||||||||||||||:||.|||||||||||||||||.|
RBAM_033630__     51 QKEIWSYLNVEAPTVTRTIKRLEENGWIQREQGEDKREKLVVLTKEAELK    100

BSNT_05562___    101 YEEINVKMLKFEEELLADFRDEDKEAFSHLFRMFLQQ    137
                     |:.||.:||||||::||||:|.||||||....:||.:
RBAM_033630__    101 YDSINQEMLKFEEDMLADFQDGDKEAFSEFLNVFLTK    137


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