Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05540 and RBAM_033510

See DNA alignment / Visit BSNT_05540 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:01
# Commandline: needle
#    -asequence pep-align/BSNT_05540___ywpJ.1.9828.seq
#    -bsequence pep-align/RBAM_033510___ywpJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05540___ywpJ-RBAM_033510___ywpJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05540___ywpJ-RBAM_033510___ywpJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05540___ywpJ
# 2: RBAM_033510___ywpJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     214/285 (75.1%)
# Similarity:   249/285 (87.4%)
# Gaps:           0/285 ( 0.0%)
# Score: 1111.0
# 
#
#=======================================

BSNT_05540___      1 MKLIAIDLDGTLLNSKHQVSLENENALRQAQLDGIEVVVSTGRAHFDVMS     50
                     |||||||||||||||.||||.|||.|||:|...|||:|||||||||||.|
RBAM_033510__      1 MKLIAIDLDGTLLNSSHQVSDENERALREAWQAGIEIVVSTGRAHFDVHS     50

BSNT_05540___     51 IFEPLGIKTWVISANGAVIHDPDGRLYHHETIDKKRAYDILSWLESENYY    100
                     ||||||||||:||||||.||.|||.|||.:.|::.||..||||||...||
RBAM_033510__     51 IFEPLGIKTWIISANGAAIHAPDGSLYHCDAIEETRARGILSWLEENQYY    100

BSNT_05540___    101 YEVFTGSAIYTPQNGRELLDVELDRFRSANPETDLSVLKQAAEVQYSQSG    150
                     |||||..|||||:.||:|||:|:||.:|||||||||||:|||.|||||||
RBAM_033510__    101 YEVFTNKAIYTPETGRQLLDIEMDRVKSANPETDLSVLEQAASVQYSQSG    150

BSNT_05540___    151 FAYINSFQELFEADQPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSS    200
                     ||||:|::||||.::.:||||||||||.:.||:|||.|:...:|||||||
RBAM_033510__    151 FAYIHSYRELFEKEEHLDFYNILGFSFDERKLKAGWDRFSGQKDLTLVSS    200

BSNT_05540___    201 AEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK    250
                     |:|||||:||.|||||||||||::|.||:.|||||||||||.|||:||||
RBAM_033510__    201 ADHNFELASRNASKGQALKRLAQKLGIPMAETAAVGDSLNDYSMLQAAGK    250

BSNT_05540___    251 GVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHLM    285
                     |:||||||||||.||||||||||::|||||:::|:
RBAM_033510__    251 GIAMGNAREDIKEIADAVTLTNDQNGVAHMIRNLL    285


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