Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05518 and RBAM_033310

See DNA alignment / Visit BSNT_05518 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:00
# Commandline: needle
#    -asequence pep-align/BSNT_05518.1.9828.seq
#    -bsequence pep-align/RBAM_033310___ywqL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05518-RBAM_033310___ywqL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05518-RBAM_033310___ywqL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05518
# 2: RBAM_033310___ywqL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 269
# Identity:     164/269 (61.0%)
# Similarity:   172/269 (63.9%)
# Gaps:          89/269 (33.1%)
# Score: 846.0
# 
#
#=======================================

BSNT_05518         0 --------------------------------------------------      0
                                                                       
RBAM_033310__      1 MKIHQIHDFDLNDESDFIRTQQSLIHKINLSPVIHPDSVNTCAGVDLAYW     50

BSNT_05518         1 --------MCSIIVIDADTKEVIEKVHSMGKISVPYVSGFLAFRELPLII     42
                             :|||||||||||||||||||||||||||||||||||||||||
RBAM_033310__     51 EQDGEPYGVCSIIVIDADTKEVIEKVHSMGKISVPYVSGFLAFRELPLII    100

BSNT_05518        43 EAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKI     92
                     |||:|||.||||||||||||||||||||||||||||||||||||||||||
RBAM_033310__    101 EAAEKLEAEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKI    150

BSNT_05518        93 KGYDFVMPENEVGAYTDILIDGEVYGRALRTRRDVKPIFLSCGNYIDLDS    142
                     ||.||.|||||||||||||||||||||||||||||||||||||:.|||:|
RBAM_033310__    151 KGCDFEMPENEVGAYTDILIDGEVYGRALRTRRDVKPIFLSCGHNIDLES    200

BSNT_05518       143 SYQITMSLINQESRLPIPVRLADVETHVLRTFYRKITCNTWGSKSSSVFL    192
                     ||||||.:||::|||||||||||:|||||||||||...            
RBAM_033310__    201 SYQITMKMINRDSRLPIPVRLADLETHVLRTFYRKNHV------------    238

BSNT_05518       193 YVCAFMVSKTLSSLWRGFI    211
                                        
RBAM_033310__    238 -------------------    238


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