Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05480 and RBAM_033120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:58
# Commandline: needle
# -asequence pep-align/BSNT_05480___rbsC.1.9828.seq
# -bsequence pep-align/RBAM_033120___rbsC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05480___rbsC-RBAM_033120___rbsC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05480___rbsC-RBAM_033120___rbsC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05480___rbsC
# 2: RBAM_033120___rbsC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 323
# Identity: 289/323 (89.5%)
# Similarity: 306/323 (94.7%)
# Gaps: 1/323 ( 0.3%)
# Score: 1432.0
#
#
#=======================================
BSNT_05480___ 1 MKTEQL-QTEQKRIHFDGVMQKLGPFLGLFILVIIVSILNPSFLEPLNIL 49
||||.: .|||||.......|||||||||.|||:|||:||||||||||||
RBAM_033120__ 1 MKTEPMTSTEQKRFSIHTFTQKLGPFLGLLILVLIVSVLNPSFLEPLNIL 50
BSNT_05480___ 50 NLLRQVAINGLIAFGMTFVILTGGIDLSVGAILALSSALVAGMIVSGVDP 99
|||||||||.|||||||||||||||||||||||||||||||||:|||:||
RBAM_033120__ 51 NLLRQVAINALIAFGMTFVILTGGIDLSVGAILALSSALVAGMMVSGIDP 100
BSNT_05480___ 100 VLAIILGCIIGAVLGMINGLLITKGKMAPFIATLATMTVFRGLTLVYTDG 149
:||:|:||:|||||||||||||||||||||||||||||||||||||||||
RBAM_033120__ 101 ILAVIIGCVIGAVLGMINGLLITKGKMAPFIATLATMTVFRGLTLVYTDG 150
BSNT_05480___ 150 NPITGLGTNYAFQMFGCGYFLGIPVPAITMVLAFVILWVLLHKTPFGRRT 199
|||||||:|||||:||.|||||||||||||::||..||||||||||||||
RBAM_033120__ 151 NPITGLGSNYAFQLFGRGYFLGIPVPAITMLIAFAALWVLLHKTPFGRRT 200
BSNT_05480___ 200 YAIGGNEKAALISGIKVTRVKVMIYSLAGLLSALAGAILTSRLHSAQPTA 249
|||||||||||||||||.|:|:|||||.|||||||||||||||:||||||
RBAM_033120__ 201 YAIGGNEKAALISGIKVPRIKIMIYSLTGLLSALAGAILTSRLNSAQPTA 250
BSNT_05480___ 250 GESYELDAIAAVVLGGTSLSGGRGRIVGTLIGVLIIGTLNNGLNLLGVSS 299
||||||||||||||||||||||||||:|||||||||||||||||||||||
RBAM_033120__ 251 GESYELDAIAAVVLGGTSLSGGRGRIIGTLIGVLIIGTLNNGLNLLGVSS 300
BSNT_05480___ 300 FYQLVVKGIVILIAVLLDRKKSA 322
|||||||||||||||||||||||
RBAM_033120__ 301 FYQLVVKGIVILIAVLLDRKKSA 323
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