Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05461 and RBAM_032940
See
DNA alignment /
Visit
BSNT_05461 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:56
# Commandline: needle
# -asequence pep-align/BSNT_05461___gerBC.1.9828.seq
# -bsequence pep-align/RBAM_032940___gerBC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05461___gerBC-RBAM_032940___gerBC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05461___gerBC-RBAM_032940___gerBC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05461___gerBC
# 2: RBAM_032940___gerBC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 376
# Identity: 252/376 (67.0%)
# Similarity: 301/376 (80.1%)
# Gaps: 2/376 ( 0.5%)
# Score: 1331.0
#
#
#=======================================
BSNT_05461___ 1 MKTMLKLFVMVLMLQMLCGCWDVKNIEKLSFARGLALDETDDHQYKLTYQ 50
|...:|....:.:|..|.||||.|.:||||||||||:|||.|.:||||||
RBAM_032940__ 1 MTLFIKWAAALFILMTLSGCWDAKEVEKLSFARGLAIDETSDRRYKLTYQ 50
BSNT_05461___ 51 NLLPQSEDSQASGKPEFVNVTSHGKTILEAVSDVSIKDPPIYSDHLKVIL 100
|||||||:|||||:|.|||||:.|.|||||||:||:||||:|||||||::
RBAM_032940__ 51 NLLPQSENSQASGRPVFVNVTTRGDTILEAVSEVSLKDPPVYSDHLKVLI 100
BSNT_05461___ 101 LGEKLMRNQNIDQVFNHFIRDDELRRSSYLMAARGKAGDIFTKGSPKQQL 150
..:||:.:|||.|:.|||||||||||||||.||||||.||.|:.:|.||.
RBAM_032940__ 101 FSDKLLADQNILQMMNHFIRDDELRRSSYLFAARGKASDILTEPTPNQQQ 150
BSNT_05461___ 151 PMPSEKLIDLTNNSGYNGKIMMPLRIGRASIYCQNGYSFLIQAVKNQKGK 200
||.:|||||||||.||||||:.|||||||||||.|..|||||||.|||||
RBAM_032940__ 151 PMAAEKLIDLTNNGGYNGKILKPLRIGRASIYCHNKLSFLIQAVSNQKGK 200
BSNT_05461___ 201 AKYDGAGIIKRG-SNKLVGFLSADETQTLTWVMGTIQGGVMPTTDK-GHP 248
..||||.|||.. .|:|.||||:.|.|:|.|:||||:|||:|..|| |||
RBAM_032940__ 201 TVYDGAAIIKNAKQNRLAGFLSSYEIQSLNWLMGTIRGGVLPALDKGGHP 250
BSNT_05461___ 249 ITFEIKKSKTKIKPVIDNGKPVFQISVKTKGILTEDQNPNENSFSKRYLH 298
||||||||.:.|.|.:.|||..|.::|||||:|:|||...|:||.:.||:
RBAM_032940__ 251 ITFEIKKSTSSITPRLKNGKLSFHVAVKTKGLLSEDQYAGEDSFDQHYLN 300
BSNT_05461___ 299 RLENIFEKKLERDVKQVMDKLQHEYKTDPVFLSDHIRIQHPDYWNKVKGH 348
.||.||||||:.|||:|:||||::|:|||||.||.:|||:||||.|||.|
RBAM_032940__ 301 GLEKIFEKKLKSDVKEVIDKLQNQYETDPVFFSDRVRIQYPDYWKKVKHH 350
BSNT_05461___ 349 WDEIFSEADFKYDISFKIINFGTVGK 374
|||.||||.|.||:|.:|.||||:|:
RBAM_032940__ 351 WDETFSEAAFDYDVSIQITNFGTMGR 376
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.