Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05394 and RBAM_032640

See DNA alignment / Visit BSNT_05394 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:52
# Commandline: needle
#    -asequence pep-align/BSNT_05394___degU.1.9828.seq
#    -bsequence pep-align/RBAM_032640___degU.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05394___degU-RBAM_032640___degU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05394___degU-RBAM_032640___degU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05394___degU
# 2: RBAM_032640___degU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity:     228/229 (99.6%)
# Similarity:   229/229 (100.0%)
# Gaps:           0/229 ( 0.0%)
# Score: 1171.0
# 
#
#=======================================

BSNT_05394___      1 MTKVNIVIIDDHQLFREGVKRILDFEPTFEVVAEGDDGDEAARIVEHYHP     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032640__      1 MTKVNIVIIDDHQLFREGVKRILDFEPTFEVVAEGDDGDEAARIVEHYHP     50

BSNT_05394___     51 DVVIMDINMPNVNGVEATKQLVELYPESKVIILSIHDDENYVTHALKTGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032640__     51 DVVIMDINMPNVNGVEATKQLVELYPESKVIILSIHDDENYVTHALKTGA    100

BSNT_05394___    101 RGYLLKEMDADTLIEAVKVVAEGGSYLHPKVTHNLVNEFRRLATSGVSAH    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032640__    101 RGYLLKEMDADTLIEAVKVVAEGGSYLHPKVTHNLVNEFRRLATSGVSAH    150

BSNT_05394___    151 PQHEVYPEIRRPLHILTRRECEVLQMLADGKSNRGIGESLFISEKTVKNH    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032640__    151 PQHEVYPEIRRPLHILTRRECEVLQMLADGKSNRGIGESLFISEKTVKNH    200

BSNT_05394___    201 VSNILQKINVNDRTQAVVVAIKNGWVEMR    229
                     |||||||:|||||||||||||||||||||
RBAM_032640__    201 VSNILQKMNVNDRTQAVVVAIKNGWVEMR    229


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