Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05344 and RBAM_032290

See DNA alignment / Visit BSNT_05344 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:47
# Commandline: needle
#    -asequence pep-align/BSNT_05344___yvkN.1.9828.seq
#    -bsequence pep-align/RBAM_032290___yvkN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05344___yvkN-RBAM_032290___yvkN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05344___yvkN-RBAM_032290___yvkN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05344___yvkN
# 2: RBAM_032290___yvkN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 86
# Identity:      55/86 (64.0%)
# Similarity:    62/86 (72.1%)
# Gaps:          10/86 (11.6%)
# Score: 252.5
# 
#
#=======================================

BSNT_05344___      1 MEKDPSDYTVTQESVLKLIHEQKRMNREMIAELEQIH-GPFPISHDIQYI     49
                     |||||.:..||:||:..||.||||||.||:||||||. .|.|||||||||
RBAM_032290__      1 MEKDPENAQVTEESLRNLIREQKRMNSEMLAELEQIKAAPLPISHDIQYI     50

BSNT_05344___     50 KVLLDSSNTHIVQDLMSVSKQL--YKKTL-------     76
                     |||||||:|||:||||.:||||  .||..       
RBAM_032290__     51 KVLLDSSSTHILQDLMHLSKQLPQQKKACNTTAQNR     86


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