Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05343 and RBAM_032280

See DNA alignment / Visit BSNT_05343 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:47
# Commandline: needle
#    -asequence pep-align/BSNT_05343___yvlA.1.9828.seq
#    -bsequence pep-align/RBAM_032280___yvlA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05343___yvlA-RBAM_032280___yvlA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05343___yvlA-RBAM_032280___yvlA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05343___yvlA
# 2: RBAM_032280___yvlA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 108
# Identity:      71/108 (65.7%)
# Similarity:    94/108 (87.0%)
# Gaps:           0/108 ( 0.0%)
# Score: 402.0
# 
#
#=======================================

BSNT_05343___      1 MNRNQAIIASLCYFSVFIAPIIVPIVAYFVVNEKETKRHAIRSLISHIVP     50
                     ||||||||||:||||||:||:|:||||||||:||||||||:|:|||||:|
RBAM_032280__      1 MNRNQAIIASICYFSVFLAPLILPIVAYFVVDEKETKRHAMRALISHIIP     50

BSNT_05343___     51 FVGWLFLFIALLGGAVAIDGDSLLPVFVIIGGAVIYFLVVIGIIIWNVIQ    100
                     |.|.|.:...::||.:...|:|::||||:|.||.:|||::||::|||::|
RBAM_032280__     51 FAGLLIVTAGVVGGLITAQGESMVPVFVMITGAAVYFLILIGMVIWNIVQ    100

BSNT_05343___    101 GIKVLRAA    108
                     ||||||..
RBAM_032280__    101 GIKVLRQV    108


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