Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05334 and RBAM_032240

See DNA alignment / Visit BSNT_05334 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:46
# Commandline: needle
#    -asequence pep-align/BSNT_05334___yvnB.1.9828.seq
#    -bsequence pep-align/RBAM_032240___yvnB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05334___yvnB-RBAM_032240___yvnB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05334___yvnB-RBAM_032240___yvnB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05334___yvnB
# 2: RBAM_032240___yvnB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1293
# Identity:     900/1293 (69.6%)
# Similarity:  1070/1293 (82.8%)
# Gaps:           8/1293 ( 0.6%)
# Score: 4863.0
# 
#
#=======================================

BSNT_05334___      1 MRKYTVIASILLSFLSV--LSGGHHESKAFPVVQQELFQTPHYIPLLENP     48
                      .|..:....|:..|.|  .:....:..|.||.|||..|.||||||||||
RBAM_032240__      1 -MKLVMTLFFLIGLLCVSPSADAARKESAIPVNQQEFGQPPHYIPLLENP     49

BSNT_05334___     49 PQIDVKAEMRSNLMIEAQVRDNSYQAFSAFLFYKQSNELGYKMVPMDPTP     98
                     |||:|||||:.||.|:|.||:..|||||||||||||||||:|||||:|.|
RBAM_032240__     50 PQIEVKAEMKRNLFIQAHVRNADYQAFSAFLFYKQSNELGFKMVPMEPAP     99

BSNT_05334___     99 GAVRKFLAQIPKRLIWNSELEYYIVMSNGKQRVESETKKLKLEGYQADLA    148
                     ||:|.|.||:.||.|||.|||||:|.:||:||.|||.|:|||:||||||.
RBAM_032240__    100 GAIRLFTAQVSKRDIWNGELEYYLVFTNGRQRAESEKKRLKLDGYQADLN    149

BSNT_05334___    149 HIPELLITELAVDTKNIGRADGYEFIEIFNTTDRTIDFKDYHIRYRYPKE    198
                     |||||:||||||||||...||.|||||::|||||.|.|||||||||||||
RBAM_032240__    150 HIPELMITELAVDTKNEDGADAYEFIEVYNTTDRPIHFKDYHIRYRYPKE    199

BSNT_05334___    199 GPDSDLIWRPDERILIPSGETFVVWLKPAGHPELTSEDFNRYYQTQLKEG    248
                     ||:||:||||.|..:||||.|:|.||:.|. .|||.:||||||.|:||||
RBAM_032240__    200 GPESDMIWRPKEDTVIPSGGTYVFWLRRAA-SELTIDDFNRYYGTRLKEG    248

BSNT_05334___    249 KNLAVIDETEGMANTRPRAVVISTNTGKDISVAHYRKHALRRLSSVLYKY    298
                     ::||||:.|:||:|.|||.||:|.||||.|:.|||||||.|||:|:||||
RBAM_032240__    249 EHLAVIEGTDGMSNGRPRTVVLSANTGKGIASAHYRKHAFRRLTSLLYKY    298

BSNT_05334___    299 PLNGTAELLNISIGEKNPSPGTVLQAQVPEQKRKIKLDKEKPVIEDLTDR    348
                     |||||.|||.||..|..||||:|.|||:|:|||.||.|||||||||||||
RBAM_032240__    299 PLNGTGELLKISTSEHKPSPGSVFQAQIPQQKRVIKPDKEKPVIEDLTDR    348

BSNT_05334___    349 KPVRPAESIELRADIRDRSLVKTAAFYYRTDENKPFKRILAEKDRNDNLY    398
                     |||||||||||:|||:|::|||||||||||:|.||||||||||||||:||
RBAM_032240__    349 KPVRPAESIELKADIKDKNLVKTAAFYYRTNEKKPFKRILAEKDRNDSLY    398

BSNT_05334___    399 HYIVYSPELIGKDQLEYYVAAGDGINEARTPVKMIDIKQTSKAHGLRMNI    448
                     |:|:|||||:|:||||||:||.||.|||:||||||||:||||:||||||:
RBAM_032240__    399 HHILYSPELLGQDQLEYYIAASDGENEAKTPVKMIDIEQTSKSHGLRMNV    448

BSNT_05334___    449 ENRDTLSGTQFLKATTEGRADSIKLWIDGKKQVTEPAMEKEVYFAFDTRK    498
                     |..||:|||..||||::..||.||||||||:|.|.||:|||||||||.||
RBAM_032240__    449 EPEDTISGTYLLKATSDVSADKIKLWIDGKRQETRPALEKEVYFAFDARK    498

BSNT_05334___    499 TNLYFKNAVTMEGKVLKVFDDTTNKYRTYSVPLPETLLRKGKQLQRITIR    548
                     |||||:|.|.||.:||.:||:.:::|||:||.|||.||:||.:.|:::||
RBAM_032240__    499 TNLYFQNTVIMENEVLHIFDEPSHRYRTHSVLLPERLLQKGGKTQKVSIR    548

BSNT_05334___    549 SGSKVSPFDTAENRDDFLVKNARLVLSDGTVIRDQRVSPEKELFIGDNQR    598
                     |||||||:||.||||||:||:|||||||||||:|.:..|.::|||||.:|
RBAM_032240__    549 SGSKVSPYDTGENRDDFVVKHARLVLSDGTVIKDGKTDPAEQLFIGDGRR    598

BSNT_05334___    599 SNKSWQFQFNLPDGLFTSQLLEWDTSKLSEGAHHIQASDGKENVSLVVRV    648
                     :|:...|.|:|||.||||:||.|:|:|||||.|||..|||:|.:|..|||
RBAM_032240__    599 ANQQKTFSFSLPDHLFTSRLLPWNTAKLSEGYHHIFVSDGEEQLSQSVRV    648

BSNT_05334___    649 DNSGPHIEPNITEGQTYKGNLILQADMYDKWSKIEEAEASLDGESITLPY    698
                     ||:||.|.|.|.||...|||:.|.||:.|||||:||.:|.|||||||||:
RBAM_032240__    649 DNTGPKIVPGIKEGAALKGNVELNADIRDKWSKVEEVKAFLDGESITLPH    698

BSNT_05334___    699 HTSSSDLLPGKHSLKVTATDLAGNKTVIERIFKTEREHPDQPEVIDSEAD    748
                     ||||:||.||||:|.:.|.|||||:|...|.|..:||.|:|||:.|.:..
RBAM_032240__    699 HTSSADLKPGKHTLTIIAADLAGNETRSVRTFHIKREEPNQPELADQKIG    748

BSNT_05334___    749 THKAKLSVRVKDPTNDAMDVGFYRGFQYTARN--HVKIFKHASLTEPPKS    796
                     .|||||||||||||.|.|:|.|||||:|||||  .||::|||||||||:.
RBAM_032240__    749 AHKAKLSVRVKDPTKDDMNVSFYRGFRYTARNPGSVKVYKHASLTEPPRG    798

BSNT_05334___    797 FVPERETPFTNKELERVSAADGKTVSTENKELFPYHRFEVTVDPSIDEND    846
                      :.|.|.|||..|:.|:||.||||||.|:.|.||||||||:|||||||.|
RBAM_032240__    799 -IKENEMPFTLPEMNRISANDGKTVSAESMERFPYHRFEVSVDPSIDETD    847

BSNT_05334___    847 LAEAVWKGSSLPGRKVTMYAWNYRTNEWQPVDSFVAKDDKPFTLKASVIA    896
                     |||||||||||||||||||.|||||:.||..||.:|||.|||||||:|.|
RBAM_032240__    848 LAEAVWKGSSLPGRKVTMYIWNYRTSRWQEADSVLAKDKKPFTLKAAVSA    897

BSNT_05334___    897 ADFVRESKMNVIVQDEIPPAKDMYTFVWMSDTQYYAESYPHIFDKQTEWI    946
                     ||.|:.|||||||||:| |||..|||||||||||||:.:||||||.||||
RBAM_032240__    898 ADVVKNSKMNVIVQDQI-PAKGNYTFVWMSDTQYYAQGHPHIFDKMTEWI    946

BSNT_05334___    947 KDNQKQLNIKYVFHTGDIVDDSADIRQWKNADRSMSVLDKSGIPYGVLAG    996
                     |:|:::.|||||||||||||||..::||||||.||..|||:|||||||||
RBAM_032240__    947 KENKEKHNIKYVFHTGDIVDDSMVMKQWKNADHSMRTLDKAGIPYGVLAG    996

BSNT_05334___    997 NHDVGHKDGSYRVFGKYFGSDRFDKKLHYGGSYKNNRGHYDLISSNGNDY   1046
                     |||||||||:||.||.:|||.||::.:|||||||||||||||:|::|||:
RBAM_032240__    997 NHDVGHKDGTYRTFGDFFGSRRFEQNMHYGGSYKNNRGHYDLLSASGNDF   1046

BSNT_05334___   1047 IMLYMGWGITDEDIAWMNQVLKKHPDRMAILAFHEYLLVSGNRSPIGEKI   1096
                     ||:||||||.:::|.|:|||||::|||.|||.||||||||||||||||.|
RBAM_032240__   1047 IMIYMGWGIAEQEIDWINQVLKRYPDRTAILCFHEYLLVSGNRSPIGETI   1096

BSNT_05334___   1097 FKEIVKPNPNVVMVLSGHYHSAMRKTDELDDDGDGKPDRLVHQMLADYQG   1146
                     ::::||||.||.||||||||:||:|||.|||||||||||||||:|.|||.
RBAM_032240__   1097 YRKVVKPNRNVAMVLSGHYHNAMKKTDALDDDGDGKPDRLVHQILTDYQD   1146

BSNT_05334___   1147 GPEGGQGYLRLLQFDQANDMVHVSTYSPYVKDKNYYDTDTYGNKDEFSLS   1196
                     |||||||::|::|||||.:.||:.:||||..|.||||||.:.:|||||..
RBAM_032240__   1147 GPEGGQGFMRMMQFDQAANQVHMFSYSPYTDDINYYDTDLFADKDEFSAE   1196

BSNT_05334___   1197 LDLKPRIKKVETDYFECNVYTNEELGKREQVKSGDTAEFRWDHLEPQSVY   1246
                     :||:|:.|:|.||||||||||||.||.::.||||.||.:.||.|:|.|||
RBAM_032240__   1197 MDLQPKRKRVATDYFECNVYTNELLGHKKHVKSGKTANWVWDGLQPDSVY   1246

BSNT_05334___   1247 YWYIIVEDSFNGKTKSPIWKFKTKKETYRPAPDQFDFRHVSNP   1289
                     |||.:|:|.:||||.||:|.|||....||||||||||||.|||
RBAM_032240__   1247 YWYTVVKDPYNGKTISPLWMFKTGNTPYRPAPDQFDFRHASNP   1289


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05334 and RBAM_032240

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
