Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05326 and RBAM_032180

See DNA alignment / Visit BSNT_05326 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:45
# Commandline: needle
#    -asequence pep-align/BSNT_05326___lgt.1.9828.seq
#    -bsequence pep-align/RBAM_032180___lgt.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05326___lgt-RBAM_032180___lgt.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05326___lgt-RBAM_032180___lgt.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05326___lgt
# 2: RBAM_032180___lgt
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     226/271 (83.4%)
# Similarity:   249/271 (91.9%)
# Gaps:           2/271 ( 0.7%)
# Score: 1217.0
# 
#
#=======================================

BSNT_05326___      1 MNEAIEPLNPIAFQLGPLAVHWYGIIIGLGALLGLWIAMRESEKRGLQKD     50
                     ||||..|:||||||||||:|||||||||.|||||||:||||||||||:||
RBAM_032180__      1 MNEAGTPINPIAFQLGPLSVHWYGIIIGAGALLGLWMAMRESEKRGLKKD     50

BSNT_05326___     51 TFIDLVLFAIPIAIICARIYYVAFEWDYYAAHPGEIIKIWKGGIAIHGGL    100
                     .|||||||||||||||||.|||.|||.||:.|||||||||||||||||||
RBAM_032180__     51 IFIDLVLFAIPIAIICARAYYVLFEWSYYSEHPGEIIKIWKGGIAIHGGL    100

BSNT_05326___    101 IGAILTGYVFSRVKNLSFWKLADIAAPSILLGQAIGRWGNFMNQEAHGEA    150
                     ||||.||.|||:|:.:|||||||||||||||||||||||||:||||||||
RBAM_032180__    101 IGAIATGIVFSKVRGISFWKLADIAAPSILLGQAIGRWGNFINQEAHGEA    150

BSNT_05326___    151 VSRAFLENLHLPEFIINQMYINGQYYHPTFLYESLWSFVGVIVLLLLRRA    200
                     |||:|||:||||:||||||||:||||||||||||||||.||::||||||.
RBAM_032180__    151 VSRSFLESLHLPDFIINQMYIDGQYYHPTFLYESLWSFAGVVILLLLRRV    200

BSNT_05326___    201 NLRRGEMFLIYIIWYSIGRYFIEGMRTDSLMLTDSLRIAQVISIVLIVLA    250
                     |||||.:||.|:|||||||||||||||||||||..|||||||||||||||
RBAM_032180__    201 NLRRGNLFLTYVIWYSIGRYFIEGMRTDSLMLTSQLRIAQVISIVLIVLA    250

BSNT_05326___    251 VAAIIFRRVKGYSKERYAE--    269
                     :..:||||:|||:.:|||:  
RBAM_032180__    251 IILMIFRRMKGYADKRYADTD    271


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