Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05311 and RBAM_032120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:45
# Commandline: needle
# -asequence pep-align/BSNT_05311___hisD.1.9828.seq
# -bsequence pep-align/RBAM_032120___hisD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05311___hisD-RBAM_032120___hisD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05311___hisD-RBAM_032120___hisD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05311___hisD
# 2: RBAM_032120___hisD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 437
# Identity: 344/437 (78.7%)
# Similarity: 382/437 (87.4%)
# Gaps: 10/437 ( 2.3%)
# Score: 1739.0
#
#
#=======================================
BSNT_05311___ 1 MKIKTISGAERLSLKRSIDAGTEEQRKTVRSIIEDVKANGDQAVRSYTAK 50
|||..:..:||.|||||||:||||||||||.|||||:.|||:||.:||..
RBAM_032120__ 1 MKITAVKRSERFSLKRSIDSGTEEQRKTVRGIIEDVRQNGDKAVLAYTKT 50
BSNT_05311___ 51 FDGIEIDSPLVTKEEFEEAYTSLDSRLLQVIRQAIENIREYHERQLQSSW 100
||||.::...|:.||..|||..||.:||.||||||.||:|||||||||||
RBAM_032120__ 51 FDGISLNQMAVSAEEVTEAYRLLDDQLLAVIRQAIANIKEYHERQLQSSW 100
BSNT_05311___ 101 FYHRKDGTMLGQKVTALDSAGVYVPGGTAAYPSSVLMNVIPALVAGVERI 150
|||||||||||||:|||||||||||||||||||||||||||||.||||||
RBAM_032120__ 101 FYHRKDGTMLGQKITALDSAGVYVPGGTAAYPSSVLMNVIPALAAGVERI 150
BSNT_05311___ 151 VLVTPPGKDGLLSPGVLVAAAELGIKDIYKMGGAQAIAALAYGTETIEPV 200
|||:||||||.||||||.||:|||||:|||.||||||||||||||||:||
RBAM_032120__ 151 VLVSPPGKDGRLSPGVLAAASELGIKEIYKAGGAQAIAALAYGTETIQPV 200
BSNT_05311___ 201 DKITGPGNIYVALAKREVFGDVDIDMIAGPSEIVVLADETAIPSEIAADL 250
|||||||||:||||||||||.|||||||||||||||||:||:|.|:||||
RBAM_032120__ 201 DKITGPGNIFVALAKREVFGVVDIDMIAGPSEIVVLADDTAVPKEVAADL 250
BSNT_05311___ 251 LSQAEHDKLSSCVFVTDSMALAEAVSAEVSKQLKTLPRREIAEASVRDYG 300
|||||||.|||.|.||||..||||||.||:|||:||||:||||||::|:|
RBAM_032120__ 251 LSQAEHDTLSSSVLVTDSRKLAEAVSDEVNKQLQTLPRKEIAEASIKDHG 300
BSNT_05311___ 301 CIYVAETMVEAINTVNTLAPEHLEIITQSPEALLGSIKHAGAIFLGRYSP 350
.||:||:|.:|::|||.||||||||:|.|||||||||:|||||||||||.
RBAM_032120__ 301 RIYIAESMEDAVDTVNALAPEHLEIMTHSPEALLGSIRHAGAIFLGRYSA 350
BSNT_05311___ 351 EPVGDYFAGPNHVLPTNGTARFSSPLNVTDFQKKSSIISYSQSAFEEHAE 400
|||||||||||||||||||||||||||||||||||||||||:.|||.||:
RBAM_032120__ 351 EPVGDYFAGPNHVLPTNGTARFSSPLNVTDFQKKSSIISYSRKAFETHAD 400
BSNT_05311___ 401 SIAAFARLEGLEAHARSIEARERRISK---------- 427
||:||||||||||||||||||...::.
RBAM_032120__ 401 SISAFARLEGLEAHARSIEARNGGMTDEKSGTRQNNK 437
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