Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05294 and RBAM_032000

See DNA alignment / Visit BSNT_05294 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:43
# Commandline: needle
#    -asequence pep-align/BSNT_05294___yvcI.1.9828.seq
#    -bsequence pep-align/RBAM_032000___yvcI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05294___yvcI-RBAM_032000___yvcI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05294___yvcI-RBAM_032000___yvcI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05294___yvcI
# 2: RBAM_032000___yvcI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     139/158 (88.0%)
# Similarity:   149/158 (94.3%)
# Gaps:           3/158 ( 1.9%)
# Score: 753.0
# 
#
#=======================================

BSNT_05294___      1 MTYLQRVTNCVLQTDDKVLLLQKPRRGWWVAPGGKMESGESVRDSVIREY     50
                        :||||||||||||:|||||||||||||||||||||||||||||||||
RBAM_032000__      1 ---MQRVTNCVLQTDDQVLLLQKPRRGWWVAPGGKMESGESVRDSVIREY     47

BSNT_05294___     51 REETGIYIINPQLKGVFTFIIKDGDHIVSEWMMFTFVADSYTGQNVSESE    100
                     ||||||||:|||||||||||||:.:.|||||||||||||||||:||:|||
RBAM_032000__     48 REETGIYILNPQLKGVFTFIIKEQEQIVSEWMMFTFVADSYTGRNVAESE     97

BSNT_05294___    101 EGKLQWHDVNDIQNLPMAPGDGHILDFMMKGQGLLHGTFTYTPDFELLSY    150
                     ||.|:||||.||.:||||||||||||||:|||||||||||||||||||||
RBAM_032000__     98 EGVLKWHDVKDIHSLPMAPGDGHILDFMIKGQGLLHGTFTYTPDFELLSY    147

BSNT_05294___    151 RLDPQHIK    158
                     |||||.||
RBAM_032000__    148 RLDPQLIK    155


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