Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05280 and RBAM_031910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:42
# Commandline: needle
# -asequence pep-align/BSNT_05280___yvdB.1.9828.seq
# -bsequence pep-align/RBAM_031910___yvdB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05280___yvdB-RBAM_031910___yvdB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05280___yvdB-RBAM_031910___yvdB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05280___yvdB
# 2: RBAM_031910___yvdB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 530
# Identity: 427/530 (80.6%)
# Similarity: 484/530 (91.3%)
# Gaps: 1/530 ( 0.2%)
# Score: 2200.0
#
#
#=======================================
BSNT_05280___ 1 MRFSGRFKGYNLQKFQKDLIAGIVVGVVAIPLGMAFAIASGVEPEYGLYT 50
|:|:||::||||||||||||||||||:|||||||||||||||.|||||||
RBAM_031910__ 1 MQFTGRYQGYNLQKFQKDLIAGIVVGIVAIPLGMAFAIASGVGPEYGLYT 50
BSNT_05280___ 51 VVIAGICISLFGGSKYQIGGPTGAFVPILFGIVMQYGLENLLIAGFMAGV 100
|::|||.|||.|||||||||||||||||||.||||||.||||:|||||||
RBAM_031910__ 51 VIVAGILISLLGGSKYQIGGPTGAFVPILFAIVMQYGFENLLVAGFMAGV 100
BSNT_05280___ 101 MLVLFGLFKLGKIMKFVPKPVIVGFTAGIAVLIFTEQIANFLGLRNVEKH 150
||||||:|||||||||||||||||||||||||||:||||:|||||:::||
RBAM_031910__ 101 MLVLFGVFKLGKIMKFVPKPVIVGFTAGIAVLIFSEQIAHFLGLRDIQKH 150
BSNT_05280___ 151 ENFHHNMFEIVQQLGTFNVYAILTAVIGLVILLVSAKVMPKVPGALLALL 200
|:|..|:.||.:::||.|:|:||.|.|.|.|||:||::|||:||||:|||
RBAM_031910__ 151 ESFILNIAEIGKKIGTLNLYSILIAGIALAILLLSARLMPKIPGALVALL 200
BSNT_05280___ 201 ISTVVAVVFFPDRMATIGSTYGEIPRHLPEFQFPELTLDKMVMLFPAALV 250
:||..|||||||:||||||.||||||.||..|.|:.::|.|:|:||:||:
RBAM_031910__ 201 VSTAAAVVFFPDKMATIGSAYGEIPRQLPALQLPDFSIDNMIMMFPSALI 250
BSNT_05280___ 251 IALLGGLESILSAMVADNMKGSKHDSNKELVGQGIANMAAPLFGGIPATG 300
||||||||||||||||||||||:||||:||||||||||||||||||||||
RBAM_031910__ 251 IALLGGLESILSAMVADNMKGSRHDSNRELVGQGIANMAAPLFGGIPATG 300
BSNT_05280___ 301 AIARTATNIKNGAVSPVSGVVHGVVVLLVLLVFAPYASHVPLASMAPILM 350
||||||||||||||||:|||||||.||||||||||.|.|||||||||:||
RBAM_031910__ 301 AIARTATNIKNGAVSPISGVVHGVTVLLVLLVFAPLAVHVPLASMAPVLM 350
BSNT_05280___ 351 VVAWNMSERKEVANMLRLKNADSFILAATFALTVLFDLIIGVATGLLLAF 400
|||||||||:|||||:||||.|||:|||||.|||||||||||:.||:|||
RBAM_031910__ 351 VVAWNMSERREVANMMRLKNTDSFVLAATFLLTVLFDLIIGVSAGLVLAF 400
BSNT_05280___ 401 VFFIRRMSEATRIHNQETHPVLAKREDPSVSMYAIEGPLFFGSIDSLESS 450
|||||:|||:|.|..... .|.:.:.|.|||.|:||||||||||||||:|
RBAM_031910__ 401 VFFIRKMSESTSIKTPHA-AVKSVKNDSSVSTYSIEGPLFFGSIDSLETS 449
BSNT_05280___ 451 LLEHVQKKPKTLILLMNKVHYMDTSAEAVLGNIMNRIKRHNGKLMIVGLQ 500
|||.:|:||||||||||.||||||||||||||:|||||||||:|||||||
RBAM_031910__ 450 LLERLQEKPKTLILLMNNVHYMDTSAEAVLGNVMNRIKRHNGRLMIVGLQ 499
BSNT_05280___ 501 SQPKELLHKTGLFHKIGKQHFFDHHDEITG 530
|||:||:.||||||||||||||:|.|||||
RBAM_031910__ 500 SQPRELIRKTGLFHKIGKQHFFEHQDEITG 529
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